Ciona intestinalis (yellow sea squirt): 100181169
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Entry
100181169 CDS
T01056
Name
(RefSeq) uncharacterized protein LOC100181169
KO
K10605
breast cancer type 1 susceptibility protein [EC:
2.3.2.27
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin03440
Homologous recombination
cin03460
Fanconi anemia pathway
cin04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100181169
09124 Replication and repair
03440 Homologous recombination
100181169
03460 Fanconi anemia pathway
100181169
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cin01009
]
100181169
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cin04121
]
100181169
03036 Chromosome and associated proteins [BR:
cin03036
]
100181169
03400 DNA repair and recombination proteins [BR:
cin03400
]
100181169
Enzymes [BR:
cin01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100181169
Protein phosphatases and associated proteins [BR:
cin01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100181169
Ubiquitin system [BR:
cin04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100181169
Multi subunit type E3
BRCC complex
100181169
Chromosome and associated proteins [BR:
cin03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
100181169
DNA repair and recombination proteins [BR:
cin03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
100181169
BRCA1-A complex
100181169
BRCA1-B complex
100181169
BRCA1-C complex
100181169
BRCA complex
100181169
FA (Fanconi anemia) pathway
Downstream FA components
100181169
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
RTT107_BRCT_5
Motif
Other DBs
NCBI-GeneID:
100181169
NCBI-ProteinID:
XP_002124471
LinkDB
All DBs
Position
9:4506232..4515120
Genome browser
AA seq
1589 aa
AA seq
DB search
MKNAHSSDKSEEIMPEKMISDDVSGKISSTDQKSHEVNVPASNDDGNNGQSIGNEKQNSN
DQAGDPTVKDSTPPKNAVTSEKVDSEKFLIKLKHDKTPKSKTITPPKSTPSSLGQRSGRA
RKGSFSKTPPQNSPEHVLVAAHDTLPKTPPSQLENMPVICVGETEENTQDSKAYYVDTPP
TTECSLLESNDCKKSETEKNDKVTKRQPVELGLLDFSGPSQPVKLNSQPNKKIMETCRMV
IDNLGSSKSEVLSENETGPLSDNLLVVGRSVNLTKVQSNNSDAEVATNTMKEIHEKLSQI
EEPACLIESTHDVCGSPQKQENEISVKLQGSSTYACDTDSSITNSTNCILNSEPTSNKLV
SKNDPVVVKIKRANVRNVKTRKVGVLPASRTIKKKGRPSKAVRRTSYKLKMNFASSSKKK
TGKTIKTISDRLLEQKKLSQVSTNSQSQISESVKEMEKNVLSSVEKTKDFCNESAADDRN
VLENKNKSFPSTSSEEMMCTSNGWGGTKLKIRICRSSDHSPKKSSDAATKKQNVLNEKKV
QHFLKDKPIENLPTSPAVIPNSMKLTSNRNKIAKKTGPYSKKTKIPVSTCAATDLISSSC
PLPQTDDEFKQNDKIIRSFERSLSVNLIRCDIDTLHFTHPMPKVDRKIQKGRRTGVKVES
KRIGSEDHISSSPLLFPPSQEQTNEVQKSTDQHEKDTSDNKKAIVKEKKEDSWNKIDTNM
NIVNENAGTTTNSQEEEETDHFHLPEKIKNFLSSLNKTLQLSKEIELSFPALVADFEKWR
EYCMKISHTLKLGEETHDDSNQNLETFTPNKDQVMSDDKQSQPVIKPTEIEMDDEIDCSL
PTVRHILNARERTQELDNLSSKEKNVFVEEPILIGDKEEDLVIIDEDQGLEDGNNTYLLD
DDNTPTLPESTGQSSVFPDQIQASPIQASQDMLPCSAGSTGNPVFKRSLLSLKRKRVLSS
SSDSCSPKQPKRKRIICNDEEGQSSQEFSNSGKSENCFNEHFASQASEKSIDIVNSSLQS
DPAHNLESNEGLMKDEPSKEDENMVDKEEQSMDLNNRLDENIPDTPDSPLTNDTSENEVV
KLQPNPVDMATQMDECFEEMHNSTPADILSEIDETPFTLSQIPPPTPPPPINNQPSVSAP
GPAQSDTIYVDDLLRKISEFTEDYKTVTNDDTDDTALQLDNFFIEERTKNNQPSVPKESV
NLEKHTPIPRESTVSTDTLNTSKKQVTENVKENDNMTPIESPNGSKKPLRQSSFSEPISP
LKLPSLPNKSTARKKRNSQIGVSKPDEKNSSLTPRSNPPAAVLTSKPPKPTTPSRTPKAF
VQPTSSVKKFQKNQRSTQLSECTNQATPNTPNKDINLSDVSMTIRGSNKKLGIMTSGIQG
KGQQVVRVIAKKYDGKFFNKFVNGEVTHLVVKTENTRCDRTLKYLQAIASRCWIVSILWV
TQSLKQKRLLPENEFEVIGDKIETDPVLFYGPRRSREAPKEYKLLSDYFICCYCPFALFT
AEELMELLKLCGAHVTSSLKDLASDRSNQKKMIVFDPDAYTDSLPNYNEIAARYNSEAVS
SNWALECIASFTVQPTAVYPVEEFESQLS
NT seq
4770 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatgcacacagtagtgataagagtgaagaaataatgccagaaaagatgatttct
gatgatgtgtctggcaaaatttcctctactgatcaaaagtctcatgaagttaatgtacca
gcttctaatgatgatggtaataatggtcagtccattggaaatgagaaacaaaattcaaat
gaccaagcaggtgatcctactgttaaagatagcacgccacctaaaaatgctgttacatca
gaaaaagttgacagtgaaaagtttttgataaaactgaaacatgacaagacacctaaaagt
aaaaccattactcctcccaaaagtacgccatcgtctcttggtcaaagaagtggtagagca
agaaaaggtagtttttcaaaaacaccgccccaaaatagccccgagcatgtattggttgca
gcgcatgatacattacctaagacaccaccctctcaattggaaaatatgccggttatttgt
gttggagagacagaagagaacactcaggatagcaaagcatattatgtggacacccctcca
actactgagtgctccctgcttgaaagtaatgattgtaagaagtcagaaactgaaaaaaat
gataaagttactaaaagacagccagtggaacttggtctgcttgactttagtggtccctca
cagccagttaaactcaactcacaacctaataagaaaatcatggagacctgcaggatggta
attgacaatcttggttcttccaagtcagaagttttaagtgagaacgagactgggccattg
tctgataacctcttggttgttggacgaagtgttaaccttacgaaggttcagagcaacaat
tctgacgctgaagttgccacaaatactatgaaggagatacatgaaaaactaagtcaaata
gaggagcctgcatgtttaatagaaagcacccatgatgtgtgtggctcgccacagaagcag
gaaaacgaaatatctgtaaaacttcaaggatcgtccacatatgcttgcgacacagactcg
tcaatcacaaattccacgaactgtatactgaacagcgaaccaacttctaacaagcttgtt
tcaaaaaatgatccagttgtggtgaaaataaaacgtgcaaatgtaagaaatgttaagaca
aggaaagtcggggttttgcctgcttctcgtacgataaaaaagaaaggtagaccttccaaa
gctgtgagacggacgagttataagctgaaaatgaatttcgcatcttcaagcaagaaaaaa
acgggaaaaacaattaaaacaatttctgataggttgttagagcaaaagaagttaagtcag
gtgtcaactaactcacaatctcaaatcagtgaatctgttaaagagatggaaaagaatgtt
ttaagttcggttgaaaaaacaaaggatttttgcaatgaaagtgcagcagatgatagaaat
gttctagaaaataaaaacaaaagttttccaagcaccagtagtgaagaaatgatgtgtacg
tctaatggttggggaggcacaaaactgaaaatccgaatatgtagaagttctgatcattca
ccaaaaaaatcttccgatgctgctacaaagaaacaaaacgttttaaatgagaagaaagtt
caacattttttgaaagataaaccaatagaaaacttacctacttccccagctgtaattcct
aactccatgaaactaacaagcaatagaaataaaattgcgaaaaagacaggaccatattca
aagaaaacaaaaatccctgtttctacttgtgcagctacggacctaatttcttcaagctgc
ccgttgccccaaacagatgatgaattcaagcaaaatgataaaataattcgttcatttgag
cgcagtctgtctgtaaatcttattaggtgtgacatagatactttacacttcacacacccc
atgccaaaagtcgatcgaaaaatccaaaaaggaagaagaactggagtaaaagttgaatcg
aaacgtattggaagtgaggatcatatttcctcaagtcctctcctcttcccaccatcccag
gaacaaacaaatgaagttcagaagtcgactgatcaacatgaaaaggatacatccgacaat
aagaaagctatagttaaggaaaagaaagaagatagttggaataaaatcgataccaacatg
aacattgtaaatgaaaacgctggcactactacaaattctcaagaagaagaagaaaccgac
cattttcatcttccagaaaaaatcaaaaattttctctcgtcacttaacaagactcttcaa
cttagcaaagaaattgagttaagtttcccagctttggtggctgattttgagaagtggcgt
gaatattgcatgaagatatctcatactttgaaactgggagaggaaacgcatgatgattca
aatcagaacttagaaacttttacaccaaacaaggatcaagttatgtctgatgataaacag
agccagccggttataaaaccaactgaaattgaaatggacgatgagattgactgtagtttg
cctacagtacggcacatactcaatgcaagggaaaggacacaagaattggataatttatcc
tcaaaagaaaaaaatgtttttgtagaggaaccaattcttattggtgataaagaagaggat
ctggtcattatagatgaagaccaaggattagaggatggaaacaacacatatctacttgat
gatgataacactccaacattgccagagagtactggccaatcttcagtgtttccagatcaa
attcaagcttcacctattcaggcttcacaagacatgctaccatgttcagcaggaagcact
ggtaatcctgtgtttaaaagatccctgctctcactgaagcgaaaacgtgtcctctcctct
tcgagtgattcctgctctcctaagcagccaaagaggaagagaattatctgtaatgatgaa
gaaggccaatcttcgcaagaattttcaaactcaggaaaatctgaaaattgttttaatgaa
cattttgcatctcaagcatccgaaaagtcgatagatattgttaactcttccctacaatct
gaccctgcacataatcttgaaagtaacgaaggtttaatgaaagatgaaccaagtaaagaa
gatgagaatatggtggataaagaagaacaatcaatggatttgaataatagattggatgaa
aatattccggacactcctgattcccccttgacaaatgacacatccgagaatgaggttgtt
aaactccagccaaacccagttgacatggcaacgcaaatggatgaatgttttgaggaaatg
cacaattccacacctgcagatattttgtcagaaatagatgaaactccatttaccttatct
cagatacctccccctactccacctccaccaatcaacaaccaaccttcagtgagcgcgccc
ggacctgcccaatcagatacaatttatgttgatgatcttttaagaaaaatttctgaattc
acagaagattataaaacagttacaaacgacgatacagatgacaccgcgctacaactagac
aacttttttatcgaagaaaggacaaaaaataatcaaccttctgtaccaaaagaatctgtt
aacttagaaaaacatacaccaatacccagggagtcaacagtgtctacagatacattaaac
acatctaaaaaacaggtcactgaaaatgtaaaagaaaatgataatatgaccccaatagaa
tctccaaatgggagtaaaaaacctctgagacaatctagtttttcggaacctatttctcct
ttaaaattaccaagtcttccaaacaagtctactgcaagaaaaaagcgaaacagtcaaata
ggggtcagcaaaccggatgaaaaaaattctagtttgaccccaagaagcaacccaccagct
gcagttttgacttccaaacctccaaaaccaaccacgccatcaaggactccaaaagctttc
gtacaaccaacttcttctgtcaagaaatttcaaaaaaatcagagatcaacacaactgagt
gaatgtacaaaccaggcaacccctaatacaccaaacaaagatatcaatttgagtgatgtt
tcaatgaccatacgtggatcaaacaaaaaattgggaataatgaccagtggtatacaaggc
aagggacaacaagtggtacgagttattgcaaaaaaatacgatggaaagtttttcaacaag
tttgtaaatggtgaagtgactcatttggttgtgaagacggaaaatacgagatgtgatcga
acactcaaatatctgcaagcaattgcaagtcgttgttggatagtgagcatactgtgggtc
actcagtcattgaaacaaaaaagattgcttccagaaaatgagtttgaagtgattggtgac
aaaatcgaaacagatccggttttattttacggaccgcgcaggtcacgagaagcacccaaa
gaatataaacttttatcggattattttatttgctgttactgtccattcgctcttttcaca
gcagaggagctcatggagttgttgaagttatgtggtgctcatgttacctcaagtttgaaa
gaccttgcatctgacagaagcaaccagaaaaaaatgattgtgtttgacccggacgcatat
actgactcactgccgaattataacgaaattgctgcaaggtataactctgaagctgtatcg
agtaattgggcattagaatgcattgcttcatttactgtccagccgactgctgtctatcca
gttgaggaatttgaatcacaacttagctaa
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integrated database retrieval system
