Ciona intestinalis (yellow sea squirt): 100181521
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Entry
100181521 CDS
T01056
Name
(RefSeq) pleckstrin homology domain-containing family M member 1-like isoform X1
KO
K23282
pleckstrin homology domain-containing family M member 1
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100181521
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cin04131
]
100181521
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cin04990
]
100181521
Membrane trafficking [BR:
cin04131
]
SNARE
SNARE associated proteins
Others
100181521
Domain-containing proteins not elsewhere classified [BR:
cin04990
]
Pleckstrin homology (PH) domain-containing proteins
Other PH domain-containing proteins
100181521
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUN
Motif
Other DBs
NCBI-GeneID:
100181521
NCBI-ProteinID:
XP_002122866
Ensembl:
ENSCING00000015618
UniProt:
F6ZK14
LinkDB
All DBs
Position
Unknown
AA seq
814 aa
AA seq
DB search
MFQQKYYDVMKVKEEKTVKENINNNLSSSVKQLQQECALRSDDHVTSESYFAQTFVSVVE
AAFLHGLKKKYFERRKHNQDLPRPQFWNLIGKISHRGPIEECKKLKLISTNVGRCRAWLR
IVINNGDLSFYLSSILTTTDYLNIFDKYYEDYALFKDHEQADIFLRYLHGADSLTFDLSC
NSSILNSWTKTPLEVARVIHSSNNRRPNNNYVVSGNHGKYTMPGKLPYKQSSRERKVSRE
RNATHEKESREHGIERAIESMTSQISASLPTNQLRASVDLGETPLQRNILYSRTVVKRRK
SRNLRAMSEDYGSWGSLSSGISTTSTPCLGIPRGFSQSPSFSGGSPEEESSFPDLTPTHK
VGILSNQQSTPLLHHNEDNGISQLRESPITSPQEGEFPDMMISTSTLCSEKPDVTFEPTG
SNLDEVTTFEPKNSSHDNVTPVTLDLVESTHDPINTAYDPAATYDPVDIYSRTSDSFCET
PCSPVSPGQGNSLMCGVGWSSHTDDVINNDVIKHDVIDGPPVTSQPPPREHSMASISKKV
TSEVKSENSNNSEEFVILNQDEVEEAHLLGSTRQSTMLSHMTSIANEIGLDAQNFQCAEC
SSPIGIIYGTPRLCYFTGEYYCSHCHLMDEHIIPARIVHNWDFKKYPVAKKSMIFLTQQW
KDPCIAMNVVNPTAYRYLEEMKRLLPLRIKLSSLQPYLRTCRLLDPTMMSQRLKGLTHML
GNPHLYTPNDLCLTSDGTLYNSINKVVLFGTKHVRQCQLCTAKGFVCEICTKDEVIFAFD
DITMTCEECKSVYHKRCFTDHCPRCERRHARMNL
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atgtttcagcagaagtattatgacgtcatgaaggtgaaagaagaaaaaacagtcaaagaa
aatattaacaataatctttcttcgtcggtgaaacagttacaacaggaatgtgcgttgcgt
tccgatgatcatgtgacctccgaaagttactttgcacaaactttcgtgtcggttgttgaa
gcagcatttttacatggcttaaagaaaaagtattttgaacgtcgaaaacacaaccaagat
ttgccccgtccacaattttggaatttaattggcaagatcagccatagaggtcccattgaa
gagtgcaagaaattaaaattaatctcaacgaacgtgggtcgttgtcgcgcatggttgaga
atcgtcataaataacggagatctttcgttctatctctcatctattcttacaactacggat
tatttaaatattttcgacaaatattatgaggattatgctttgtttaaggaccatgaacaa
gccgacattttccttcggtatttacacggagccgatagtttgaccttcgacctcagttgt
aattcgtcgattcttaattcatggacaaaaactccactagaggtcgctagagtgatccat
tcatcaaacaataggaggccgaacaataattacgttgtcagcggcaaccatggaaaatac
acaatgcctgggaagctaccatataagcagtcatcacgtgagcggaaagtatcacgtgag
agaaacgcaacacatgagaaggaatcacgtgaacatggtattgaacgggctatcgaaagt
atgacatcacaaatctccgcgtcgttaccgaccaatcagcttcgagcatcagttgacttg
ggggaaacccctctacagagaaacatcttatacagtcgtactgtcgtaaaacggaggaag
tctcgcaacttgagggcgatgtctgaggattatgggagttggggttcattaagttccggg
atttctacaactagtaccccatgtttggggattccccggggtttctcacaaagtccctcc
tttagtgggggttcccctgaagaggaaagttcgtttcctgatttgaccccgacccataaa
gtggggattctctcaaaccaacaatcgaccccattgttacatcataatgaagacaatgga
atttctcaactcagggaaagtcccataacttcaccacaagaaggggaattccctgatatg
atgatatcgacatcaacgctttgctcagagaaacctgacgtgacctttgaacccacgggg
tcaaaccttgatgaggtcacgacctttgaacctaagaattcatcccatgataatgtgacc
ccagtgacccttgaccttgtggagtccacccatgaccccataaataccgcatatgacccc
gctgcgacctatgaccccgtcgatatttattctcgaacctcagattcattttgcgaaact
ccctgctctccagtgtcacctggtcagggcaacagtttgatgtgcggcgtcggttggtcg
tctcacactgatgatgtcatcaataatgatgtcatcaaacatgatgtcatagacggacct
cctgtgacatcacaaccaccccctcgggaacactcgatggcctcgataagcaaaaaagtt
acgtcggaggtaaaatcggagaactcgaataattcggaagaatttgtgattttgaatcaa
gatgaagttgaagaagctcatttactcggatccactcgtcaatcaacgatgttaagtcac
atgacctcgatagccaatgagatcggactcgacgcacaaaactttcaatgcgctgaatgc
tcgtctcctattggtataatatacggaacacctcgtctttgttacttcacgggtgaatat
tattgctcacactgccacctaatggatgagcacataataccagcgaggatcgttcataat
tgggatttcaagaaatatcccgtcgctaaaaaatccatgatattccttacacaacaatgg
aaagatccttgcatcgcaatgaacgtcgttaacccgaccgcttatcgttatttggaggaa
atgaaacgtttgttgccgttaagaatcaaactttcgtcgttgcaaccttatttacgtacc
tgtcgtttgttggatcctactatgatgtcacaaagattaaaaggtttaacccatatgttg
gggaatccccatttatacacccctaatgacctttgtttaacctctgacggaactctctac
aattcaattaataaagttgttttatttgggaccaaacatgtccgccaatgccaactttgc
acagctaaaggtttcgtttgtgagatttgcacaaaagatgaggtgatatttgcatttgat
gacatcacaatgacatgtgaagaatgtaaaagtgtttatcataagcgttgttttacggat
cactgcccacgatgtgaaagacgtcacgctagaatgaacttatga
DBGET
integrated database retrieval system
