Ciona intestinalis (yellow sea squirt): 100181993
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Entry
100181993 CDS
T01056
Name
(RefSeq) 72 kDa type IV collagenase-like
KO
K01398
matrix metalloproteinase-2 (gelatinase A) [EC:
3.4.24.24
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cin01002
]
100181993
Enzymes [BR:
cin01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.24 gelatinase A
100181993
Peptidases and inhibitors [BR:
cin01002
]
Metallo peptidases
Family M10
100181993
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn2
Peptidase_M10
Hemopexin
Astacin
PG_binding_1
Reprolysin_4
Reprolysin_5
DUF4953
Reprolysin_3
Herpes_capsid
Motif
Other DBs
NCBI-GeneID:
100181993
NCBI-ProteinID:
XP_026694962
Ensembl:
ENSCING00000005511
LinkDB
All DBs
Position
Unknown
AA seq
823 aa
AA seq
DB search
MKLVFLVLCLSLFVGFIASAPAGRRQRNRNRYRNPRVLRVRGRWTQRDIANAESADSPQY
RFDANGQGWYVNPNNRPAALNAPPLGAPGAPARFVQSFRSQLNVKFGNNGPPGVVAPSQV
ISPPVGPAPNPSIGARRPDSIVELTDDDKEQIALEFFVKANYTSNSLTDKTTLVRTMQRN
YGLPITGRLDDTTVTYMMAPRCGHPDAPAEFNTFPNRDRWTSNTVTYKITGYTPDMSPCR
VRNTFKRAFRVWEEATALNFVESQTDDADMIIYFGYQEHGDGYPFDGKDGLLAHAFAAGT
HSLAGDAHFDEGEFWTLGDGRVADTYYGNADGAPCHFPFMFQNVEYTTCTTAGRSDGMEW
CATTRNFDEDQQFGFCPHEALFTYGGNADGDPCTFPFNFLGETYNTCTYDGRSDGYRWCA
TTSSFDTDKKWGFCPDRARGTEGGNANGASCVFPFIFNGNSYSDCTTIGRSDYKKWCSTT
DNYDTDGKYGFCQESGYSLFLVAAHEFGHTIGLDHSNSQGALMYPMYQKFTNFRLPQDDV
NGARDLYPAARTTPLQPLVLEKCGGDLSVTEGGTDSGTGTGTGTGTGTGTGTGTGTGTGT
GTGTGTEREQEQGPMTRTFFGDEIFIFLESQFWRWNIVTGSKSGPYPINSQWPDLPDSID
AVYRKPNDGPLVFFKGTRYWMFSGERLMAGYPKQVSTLGLPADANFKMDAALNWLRSKNR
KRTYFFVGEQFYRYNEEKSKMDRGYPKPMSLWRRVPRNVDAAMEDPTRARYSMFFKENKI
HYLNNYKVEVLQIDPLDIWLGCRTRVASAVPLRAGPSRDRGSP
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgaagttagtgtttcttgtgttatgtctttcgctttttgtgggttttatcgccagcgct
ccagcaggcaggcgtcaaagaaatcgaaatcgttaccgtaatccaagggtgctgagagtt
agaggccgttggactcagcgagatatcgcaaatgctgaatcggcagacagtcctcaatat
cgtttcgatgctaatggtcaagggtggtatgtaaacccaaataacagaccagcagctttg
aatgcaccaccacttggggcgcctggggcaccagcaagatttgtacagtcatttagatcg
caactcaacgttaaatttgggaacaacggtcctcctggagtggtggctcctagtcaggta
ataagtcctccagttggtcctgccccaaacccaagcatcggtgcacgaagacctgacagc
attgtggaactgaccgacgatgacaaagagcaaatagctcttgaatttttcgtgaaagca
aattacacttccaattctctcaccgacaagactacgcttgtacgaacgatgcaacgaaat
tatggtcttcctattacagggagactggatgatacgactgttacgtacatgatggcaccc
cgatgtggccaccccgacgcaccagcagaattcaacaccttccctaaccgtgataggtgg
acatcaaacactgtgacctataaaataacgggatacacaccagacatgagtccatgccgt
gttcgtaacacattcaagagagcatttagagtgtgggaagaagcaactgctttgaacttc
gtcgaatcacaaactgatgatgccgatatgattatttatttcggatatcaggaacacgga
gatgggtatccatttgacggtaaggacggtctgttagcgcacgcatttgctgcgggaact
cattcgcttgctggggacgcacatttcgacgaaggagagttttggactcttggcgatggt
agagtggcggatacgtattatggaaatgcggatggagctccttgccacttccccttcatg
ttccaaaacgtcgaatacacgacttgtacaacagccggaagatccgacggaatggaatgg
tgcgccaccactcggaactttgatgaagatcagcagttcggattttgtccacacgaagca
ctgttcacatatggtggaaacgccgatggggacccatgcacttttcctttcaattttctg
ggtgaaacatacaacacatgcacatacgatggaagatcggatggatacagatggtgtgcg
actaccagcagttttgatactgataaaaagtggggattctgtcctgatagagcgcgtgga
accgaaggcggcaatgcaaatggagcgtcgtgtgtttttccattcatatttaatggcaac
agttattccgactgtacgaccattggtcgaagtgattacaaaaaatggtgttctaccact
gacaactacgacaccgatggaaagtacggattttgccaagagtccggatacagtttgttt
cttgtggcagctcatgagtttgggcacaccattggtttggatcactccaactcacaggga
gctcttatgtatccaatgtatcaaaagtttacaaatttccgtcttccacaagatgatgtt
aatggagcacgggacctttatccagctgcacgaacaacaccattacagccacttgttcta
gaaaagtgtggcggagatttatcagttacagaaggggggactgatagtggaaccgggacg
gggacggggacggggacggggacggggaccggaaccgggacgggaaccgggacgggaacc
gggacgggaaccgggacggaacgggaacaggaacagggaccgatgacacgaacatttttc
ggagacgaaatcttcatatttctggaaagtcaattttggcgctggaatatagttactggc
agcaaaagtggaccttatccaataaacagtcaatggccggatttgcccgattcgattgac
gctgtgtatcgaaaaccgaacgatggacctcttgtgtttttcaaaggtacccgatattgg
atgttttcgggagaaaggctaatggcaggttatccgaagcaagtgagtacattgggtctt
cctgcggatgccaactttaagatggatgccgcgcttaattggctgcgatccaagaacagg
aagcgtacttacttttttgtaggagaacagttttataggtataacgaagaaaaaagcaaa
atggatcgaggttatccaaaaccgatgtcactatggagacgagttccgcgtaacgttgat
gctgcgatggaagatcctacaagagcacggtattccatgtttttcaaagaaaacaaaatt
cattacttaaacaactacaaggttgaggttcttcaaatcgatcctcttgatatctggtta
ggatgcagaacacgagtggcatcagctgtacctctgcgtgcagggccttcaagagacaga
ggttccccataa
DBGET
integrated database retrieval system
