Ciona intestinalis (yellow sea squirt): 100182266
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Entry
100182266 CDS
T01056
Name
(RefSeq) WD repeat-containing and planar cell polarity effector protein fritz homolog
KO
K22863
WD repeat-containing and planar cell polarity effector protein
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cin03037
]
100182266
Cilium and associated proteins [BR:
cin03037
]
Primary cilia and associated proteins
Ciliogenesis and planar polarity effectors (CPLANE) complex
100182266
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GFIT
Motif
Pfam:
Frtz
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Beta-prop_EML_2
PQQ_3
WDR55
EIF3I
WD40_like
Beta-prop_WDR19_1st
Beta-prop_LRRK2
Beta-prop_NUP159_NUP214
Par3_HAL_N_term
WD40_Prp19
Motif
Other DBs
NCBI-GeneID:
100182266
NCBI-ProteinID:
XP_009858683
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Position
5:complement(4377902..4384246)
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AA seq
610 aa
AA seq
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MASVTYNLKLWSLQQHSVLDKDGAAVRYQEKETNATPTSEYYDIKKAYVTSRDGLWCPRN
KRPVKLREQIKLVEDTLRSTEVVCVIWKHFDTVQLVFSTGLIVDIEVTKQLDIKRINFEK
SLQGKLSTPACSAIYAEQFVCFSFNSQTKLAFLSLKNEVKVSYIELPGTHSKIVRYLSVN
DSEDMMVCWWHHGPWFQTAHENEHHNMVLLGCSFGRLEVLSTILSENNLISLEFGHNNSN
QILTLEKSVNHRKERHLDFVTYECSQNKMQRLSVISFPVKTGVLSSARSSAEDKVVVGCS
DGSLTVYDLTIQQTVATVTRTGTVPTLLSWMSDVVVVGSAQGEVTLFDNALNSISFVNLE
ENASKKLELSQYISSGSGLLKIRHNNNGDMMLLFNGGPLAVLSLDGCFTTTGITKLLLAN
DNITQAVSLLCSINWNLDGEVAYQNLMRIVDHLLQLPLNHLRENQLEGSFSSFYASSRPI
SEPVVLKYRTAISCYARRFFHHLLRYSRFEKSFLLAKDIGSSDLFLDIYFAAKEVGETQL
AKLAKQKADEIIAAESSESDSEGIDLNMLSLSGVNNQDSKDYLAMELMQEMNRSAEAGAS
TLKVTNLGFV
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggcatctgtgacttataatctaaagctatggagtcttcaacaacacagtgtattagat
aaagatggagctgctgttcgttaccaagaaaaagaaaccaatgccaccccaacttcagag
tattatgacatcaaaaaagcttatgtcaccagtcgtgatggattgtggtgtcccaggaat
aaacgacccgttaaattgcgagaacaaataaagttagttgaagatacattaagaagtact
gaagttgtgtgtgtgatttggaaacactttgatacagttcagcttgtgttttctactggt
ttgattgttgacattgaagtgacaaaacaactcgatataaagagaataaactttgaaaaa
tctctacaaggaaaactatctacacctgcatgttctgcaatctatgcagaacaatttgtc
tgcttttcatttaacagccaaacgaaacttgcgttcctgtctcttaaaaatgaagtcaaa
gtttcctatattgaattaccaggtacacattcaaaaattgttcgttatttaagcgtgaac
gatagtgaagatatgatggtatgttggtggcatcatgggccttggtttcaaacggctcac
gagaacgaacatcataatatggttttacttggttgttcatttggcaggttagaagttttg
agcacaattctcagtgaaaataatctaattagccttgaatttggccacaataattcaaac
cagattcttaccctggaaaagtcagtaaaccatagaaaagaacgccatcttgattttgtg
acatacgaatgctcccagaacaaaatgcaaagacttagcgttatttcatttcccgtaaaa
actggcgttctttcatctgcacgaagcagtgctgaagacaaagtagttgttggttgtagc
gatggttctctcactgtttatgacctcacaatacaacaaactgttgccacggtaactcgt
accggcactgtacccaccctgttgtcatggatgagtgatgtagttgtggtcggcagcgcg
cagggggaagtcacgttgttcgacaacgcccttaactctatttcttttgttaatcttgaa
gaaaatgcgtctaagaaattagagctttcccaatacatttcatcgggcagtggtctttta
aaaatccggcacaataacaatggtgacatgatgctgttgtttaatggaggaccactggca
gtgctaagtttagatggttgtttcacaactactggcatcacaaaacttctgttagctaat
gataatatcacacaagcagtgtcattgttatgttcaatcaactggaaccttgatggggag
gtggcttaccagaacctcatgcgtattgtcgatcatttgctgcagttacctctgaatcat
ctccgagaaaatcaactggaaggttcattttcctcgttttatgcttcttctcgtccaatc
tcagaaccagttgtgttaaagtatcggacagctataagttgttacgctcgccgtttcttc
caccacctcctgaggtactcccgctttgaaaagtccttcctccttgccaaggacatcgga
tcttccgatctcttcctggacatttactttgcagcgaaagaagttggagagacacagctt
gctaaacttgcaaagcagaaagctgatgagattattgctgcagaatcctctgaaagcgat
tcggaaggaattgatttaaatatgttgtcactttctggagtcaacaatcaagacagcaag
gattatcttgcaatggagttaatgcaggagatgaatcgtagtgctgaagctggtgcaagt
accctgaaagttaccaatcttggatttgtatga
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