Ciona intestinalis (yellow sea squirt): 100182358
Help
Entry
100182358 CDS
T01056
Name
(RefSeq) tRNA-specific adenosine deaminase 1-like isoform X1
KO
K15440
tRNA-specific adenosine deaminase 1 [EC:
3.5.4.34
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cin03016
]
100182358
Enzymes [BR:
cin01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.34 tRNAAla(adenine37) deaminase
100182358
Transfer RNA biogenesis [BR:
cin03016
]
Eukaryotic type
tRNA modification factors
Deaminases
100182358
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
A_deamin
Motif
Other DBs
NCBI-GeneID:
100182358
NCBI-ProteinID:
XP_002130868
LinkDB
All DBs
Position
12:complement(2640995..2644522)
Genome browser
AA seq
424 aa
AA seq
DB search
MEVANTISQLCLKKFDDLPKNGKPEEGKQWTALAGFVKQCGDDYEVVAIGTGTTCLGESQ
MRKDGLILHDNHAEVIARRSFIRYLYHEILSTWQSTKTSTIFNKTNDGKCCLKSGGSFHF
YTSNTPCGDATIFPISQPLNQTQSKGVKRKCEQVKLNPEKKVCIHETADEIEQATTQTQS
DINRTGAKCVAGENSDRHGKGINYHCVGSLRTKPGRGERTTSMSCSDKILKWNLMGWQGH
LLSLLVSEPIHMKYIIVGGVADTVALKRAFYGRIFKHEKFVSLETKINLHCPLIYKTDTE
FRFGKPVFNKKHLKPCGSSLSWCKIEIKSLDVAAKSGFRLGTVKKHEGLPKSSTFISRAS
LFQLFKDVTYVLPQCSLTEHLGSMKNNSYKFHKLLAEDYEEKWKTVKMDLLQNWISHSED
LDKF
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggaagtagcaaatacgatttcgcaactttgtctcaaaaagtttgatgatttgccaaaa
aatgggaaaccggaggaaggaaaacaatggacagctttggccggttttgtgaaacaatgt
ggagatgattatgaagttgttgctattggaactggtaccacctgtttaggagaatcccag
atgagaaaagatggtttaattctccacgataatcatgcagaagttatcgcaagaaggtct
tttataagatacttgtatcatgaaatattatcaacgtggcaatcaacgaaaacttcaact
attttcaacaaaaccaatgatggaaaatgttgtttgaagtcgggtggttcttttcatttt
tacacaagcaacacaccgtgtggggatgctactatttttccgatttcacaacctcttaat
caaactcaaagcaagggagttaagagaaaatgtgagcaagtaaaattaaatccggagaaa
aaagtttgtattcatgaaacagcagatgaaattgaacaagccactacgcaaactcaaagt
gatattaatcggacaggcgcaaagtgtgttgctggtgaaaattctgacaggcatggcaaa
ggaattaattatcattgtgttggtagtttaagaacaaagcctggacgtggtgaacgcaca
acctctatgagttgcagtgataaaatacttaagtggaacttaatgggttggcaagggcat
ttattatcattactagtttccgaacctatacatatgaaatatattattgttggtggggtt
gctgatactgttgctttgaaaagagctttttatggaagaatttttaaacatgaaaagttt
gttagtttggagacaaaaatcaatctgcactgcccgttaatttacaaaacggacacagaa
tttcgattcggaaaacctgtttttaacaaaaaacatttaaaaccttgtggaagctcttta
tcgtggtgcaaaattgaaatcaaatcgttggacgttgcagcaaaaagtggttttcgtttg
gggacggtaaaaaaacatgaaggcctccctaaatcttccacatttatatccagagctagt
ttgtttcaattgtttaaggatgttacttatgttttaccacagtgcagcctcacagagcac
cttggtagcatgaaaaacaattcgtataagtttcataaacttttggcggaagattatgaa
gaaaaatggaaaactgtaaaaatggacttgctgcaaaactggatttcgcacagtgaggat
ttggacaagttttaa
DBGET
integrated database retrieval system
