KEGG   Ciona intestinalis (yellow sea squirt): 100182397
Entry
100182397         CDS       T01056                                 
Name
(RefSeq) survival of motor neuron-related-splicing factor 30-like
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
cin  Ciona intestinalis (yellow sea squirt)
Pathway
cin03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cin00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100182397
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cin03041]
    100182397
Spliceosome [BR:cin03041]
 Complex A
  U2 snRNP components
   U2 related factors
    100182397
 Complex B
    100182397
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    100182397
SSDB
Motif
Pfam: DUF2660 SMN_Tudor DUF4537 TUDOR Tudor_FRX1
Other DBs
NCBI-GeneID: 100182397
NCBI-ProteinID: XP_002129900
Ensembl: ENSCING00000008082
LinkDB
Position
8:complement(1243221..1245555)
AA seq 235 aa
MEELTASLKSYKVQYAQVEAALAADEENDELLKLKQDLVEVIQLTEDLISAENEDGQGSS
KSKPKLEWGIGDKCLALKADEGKYYEAVVEDILAESEYVAVAFCESGKSDICQMSALKPA
IGGKAGPGSLHWKSKNHLKKEQSIAQREYRKKRNLKKKMRLKEKEAESEISKNKWKDFNK
KVYSKTSKGKVKRSIFASPEGAGGKVGIGTCGVADKEMTKYDHGAKYNARHLVPR
NT seq 708 nt   +upstreamnt  +downstreamnt
atggaagagttaacggccagcttgaaaagttacaaagtccaatacgcgcaagtggaagct
gctcttgctgccgatgaagaaaacgatgaattgctcaagttaaaacaagatctagttgaa
gttattcaacttacagaagatttaattagcgctgaaaatgaagatggtcaaggctcatct
aaatccaaaccaaagttagagtggggtattggagataaatgcttagctttgaaagcagat
gaaggaaagtattatgaagctgtagtagaagacatactcgctgagagtgaatatgtggcg
gtcgcattttgtgaaagtggaaaatcagatatttgtcaaatgtcggccctcaaacctgca
attggtggtaaggctggaccaggttctttgcattggaaaagcaaaaaccacttgaaaaag
gagcaatctattgcccagcgtgaatacagaaaaaagagaaacttgaaaaagaaaatgaga
ttaaaggagaaagaggccgagtctgaaatttccaaaaacaaatggaaagatttcaacaaa
aaagtttattcaaagacttcaaagggaaaggtaaaaagaagtatttttgcttctcctgaa
ggggcgggtggtaaggtaggtattggaacctgtggtgtagcagataaggagatgaccaaa
tatgaccatggagcaaaatacaatgcacgtcatcttgtaccaagatga

DBGET integrated database retrieval system