Ciona intestinalis (yellow sea squirt): 100182571
Help
Entry
100182571 CDS
T01056
Name
(RefSeq) transmembrane cell adhesion receptor mua-3 isoform X2
KO
K06825
fibrillin 1
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04350
TGF-beta signaling pathway
cin04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
100182571
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
100182571
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cin00536
]
100182571
Glycosaminoglycan binding proteins [BR:
cin00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
100182571
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
FXa_inhibition
EGF_CA
cEGF
VWA_2
EGF
EGF_3
VWA_3
Motif
Other DBs
NCBI-GeneID:
100182571
NCBI-ProteinID:
XP_002123195
LinkDB
All DBs
Position
Unknown
AA seq
2264 aa
AA seq
DB search
MMSLKLIFAVLAIAVFVNSQEVTPPQPPQPTPEGCPPRAVMDLVVLLDSSSSVGAANFQI
LREFLTNLTQNYYVGNDGMLMGLTRYNRRINDRWDLNDFSTTAQLEQAISNIPYNGGGTF
TGAGLSFLAREKFTAAAGRRVGVPAIALVITDGRANDDVAGPAEALHQVATVIALGIKGA
VPAEINTIASPHPDNSYAHIIDDFSQLPDIFSAISAVVCEAQGAQAAQADPSVSPPPPPA
PTTQPPPPPSATTECDNPIDLAFIVDSSSSVGADNFQLIKDFVYEIINGLNISETETRVT
LARYNNWVDSRFFFNTHFDKSAMLDAVSNMPYYGRGTKTAQALHVVTSHHLQKYNGWREG
VDAYPTVVIVLTDGRTKDFQDLGRFSRALKAKATRVIAIGVGDGAYADELVTIATAPSSE
NVVMVPFEQLITRASNLINMVCITDVNECLVDNGQCDQVCVNTHNSFYCECQEGFTLGVD
AASCVDNNECLTDNGGCSDTCTNTDGSFVCSCPVGRIPAGDGRTCVDDSCYENTECDHNC
HNVVEGTFFCSCNAGYQLNEDGKTCSDIDECLNNNGGCEVLCNNTDGGYVCACPEGQGLR
NDGRTCGTMCYTCQRATSNEECMEQTVCSPGESSCQTETRFENQVMYITKSCKQTEACVN
NYIQNPKTAWSPYQCNTDPNGISVCRCCCHNNLCNAPGNCTLADDVDISCEDPNLIETPE
DMTMTCSGNDLGDTCLLTCPPGYQPVSGASELVCRLTPRSLEGYWDGEVGACGDIDECAN
NNGGCSHFCTNTNGSYSCSCPDSNPCENQLLDLFFILDSSSSVRAANFEKMKNFVDRMVD
PLNVGQDRVRVGVMTYNRKTFKRIDFNEAANNTDFSEKLAAIQYSGRGTKTAQAINFAAS
NCLHESRGRRPNVPLSVILMTDGRSQDWRQLPSAAATMHQKANMFFSIGITNRVNERELL
TIANDDPTKYTILPSFDSLDSADLAQFSGSTCLQPEPQHFLASDGKTCDVDECSVDNGGC
SHNCTNTIGSFYCSCPEGQTIVADGVTCDVDECLVDNGGCEQGCINKLGGFNCLCGNEYE
VEGFTCDDFNECVDENGGCSHQCVDLSPGYECACPAGMLLGPDMQTCEVDSCAALVAPFV
CDQNCHNIVGGSYTCSCDDGYILEADGHNCTEINECDNNNGGCEEICENTPGSYNCACPP
GFGLRDDGKTCGIQCYACQNVLSNEECGELVACAVSQDACFTTMRTRDNVTSITKGCQQT
QACINNMVQNNRNMGEGPSQCNGNLQNSKCECCCVESACNADLCPYEMDIAGCESFVKTD
VVFTGERQDGSIGPGGMAKVECAPGYTFASNNSAPVQLNCNYNYANNTAAWDGDYNELDE
CVDVDECANSENGGGCANPAVCVNLPGTFECVCPDEPDDFVLIDGSICERDECSDPDMGG
CSHNCTNTIGSYMCFCPSGMTLIEDQLTCNVDECQDANGGCQQTCVNTLDGYRCECGQGL
ELNADLHTCDDINECLINNGECSHNCTNLVPGYECSCPENMILNGDGFTCRVNPCYTNNG
GCGGVCTPLEVGFQCSCPQGYDLLEDGSCLDINECENNNGGCQYNCTNTDGSYVCSCPVG
QGLHGNGRTCGRACYHCNGASTNDECNAMPIQICTDDAQSCENEVRINAGVKQIFKGCKQ
TQACNNNYIQNPRSAFEPSQCNGNLGNDVCRCCCAGHLCNFNEKPCQAPQACHIRKADVA
IVVDSSSSVKYNNFQKMKSFTSSLFQSFKLGDDRVRAALVRYNRRVDQRFGFADTNTKEE
VQDGVDAMPYRGGGTLTGQALQHVIDNTLKTENGARDDAQKIVITITDGRSQDDVLTPSR
ALRAAGVITFGIGIGARVLETQINEIGGDPSRTFSVETFDQLSGLVLNRVREAVCYDVNE
CNTNNGGCSDTCVNTAGSFHCACQDGFILSDDLSTCITNSTGARASFDECSVNNGGCSDG
CTDTLVGFNCTCPVGFVLMSDMLTCTDADECLTAACSHSCVNTPGSYFCECPPDHYMAED
KITCEPRASVADCAAGFLPKGHSCTQQSSDMMAYVPAEEACAAAGGRLMKIADYGVKQIM
SRNYQGANWFGLTDRSEEGVWVNSDGTALEYEEGWASNQPGVGDCGSLEHYAFYSKLCSR
EMKYICEQSRAEGLVIFDRTWPNGAQAKLYFPTDVNAVKITFPQPVIRVNAWFSQVAQQL
SSTEFVISQNDIHRQSSHGEGQFTVDMNEVRFPDYDITVTPYEL
NT seq
6795 nt
NT seq
+upstream
nt +downstream
nt
atgatgagtctcaaattaatcttcgcggtcttagccatcgcagtcttcgtgaactcacaa
gaagtgacaccaccccaaccgccccaacccacacccgagggttgccctcctcgtgctgtg
atggaccttgtcgtattgctcgactcaagctcgtccgtcggggcggcgaactttcaaatt
ttgagggagttcttgacaaacttgacccaaaactattacgttgggaacgatggtatgctg
atgggtctgacaagatacaaccgaaggatcaacgatcgttgggaccttaacgatttctca
accaccgcacaactagaacaagcaatctcgaatatcccttacaacggcggaggaacattc
accggggcgggtctaagttttctcgcaagggagaaatttaccgcagccgctggaaggcga
gtaggagttccagccatcgcgcttgttattaccgacggtagagcaaacgacgatgtagct
ggacccgcagaagccttgcatcaagtggcaaccgtaatagcgcttggtatcaaaggagca
gtcccagctgaaatcaacaccatagcttctcctcaccccgacaactcatacgcacacatc
atcgacgacttctcgcagctccccgacatattcagcgcaatttccgccgtggtttgcgaa
gctcaaggcgctcaagccgctcaagccgatccgtcagtttcaccgccaccaccaccggca
ccaacaacccagccaccgccaccaccatcagcgaccacagaatgcgacaacccaattgat
ttggctttcatcgtcgattcatcaagctcggttggcgctgataatttccaacttatcaag
gatttcgtttacgagatcatcaatgggttgaacatcagtgaaactgagacccgagtaacc
cttgctcgttacaacaactgggttgattcaagattcttcttcaacactcactttgataaa
agtgcaatgcttgacgctgtgtccaacatgccatactatggacgtggaacaaagacggca
caagctcttcatgttgtaacaagccatcatctccagaaatacaacggatggagagaaggc
gtcgacgcttacccaacagtggtgatcgtcctcaccgatggaagaaccaaggacttccaa
gacttgggaagattctcccgagcattgaaagcaaaggcaacgcgagtgatcgccattgga
gtcggagatggagcatacgccgatgaacttgttacaatcgccaccgccccatcatccgag
aacgtcgtgatggttcctttcgaacaacttatcaccagagccagcaaccttattaacatg
gtttgcatcaccgatgtgaatgaatgcctcgtcgataacggtcaatgcgaccaggtctgt
gtaaacacacacaattcattctactgcgaatgccaagaaggcttcacccttggtgtagat
gccgcttcatgcgttgataacaacgaatgtttgactgacaacggtggttgtagcgacaca
tgtactaacaccgatggttcattcgtttgttcttgcccagttggtcgaatcccagccgga
gacggccgcacttgtgttgacgacagctgttacgaaaacaccgaatgcgaccacaattgc
cacaacgtcgtcgaaggaactttcttctgtagttgcaatgctggttaccaactcaacgaa
gatggaaaaacttgctcagacatcgatgaatgcttgaacaacaatggcggatgtgaggta
ttatgtaataacaccgatggtggatacgtgtgcgcctgcccagaaggacaaggtttgagg
aacgatggccgaacatgtggcaccatgtgttatacttgccaacgagcaacctcaaacgag
gaatgcatggaacagaccgtgtgctcaccaggagagtcatcatgccaaaccgagacaagg
ttcgagaaccaagttatgtacatcaccaagtcatgcaagcaaaccgaggcgtgcgtcaac
aactatatccaaaaccccaaaactgcgtggtctccataccagtgcaacaccgaccccaac
ggaatctccgtgtgccgatgttgctgccataacaacctttgtaacgcccctggcaactgc
acactcgctgatgacgtagatatcagctgtgaagaccccaacctcatcgaaacacccgaa
gacatgaccatgacatgctcaggaaatgaccttggagatacttgtctacttacgtgccca
ccaggataccaaccagtgagtggcgccagtgagctcgtgtgccgacttaccccaagaagt
cttgaaggttactgggacggagaagttggagcatgtggagatatcgatgaatgcgccaat
aacaacggtggatgttcccacttctgcaccaacaccaacggatcatattcttgctcctgc
ccagacagcaacccatgcgagaaccaacttctcgatcttttcttcatccttgattcctcc
tcctccgtgagagccgccaacttcgaaaagatgaagaacttcgtcgaccgaatggttgat
ccactcaacgttggacaagaccgagtccgagttggagttatgacatacaacagaaaaacc
ttcaaaaggatcgactttaacgaggccgcaaacaacaccgacttttcagaaaaacttgcc
gcgatccaatacagcggacgaggcaccaagactgcccaagccatcaacttcgctgcttcc
aactgtcttcatgaatctcgaggacgacgacccaacgttcctctctctgttatccttatg
actgacggaagatcccaagactggagacaactcccatcagcagcagcaaccatgcaccaa
aaagcaaatatgttcttctcaattggaatcaccaaccgcgtcaacgagagagagctcttg
acaatcgccaacgacgacccaaccaaatacaccatcctgccgagtttcgactccttggac
agcgccgacctcgctcagttctctggatcaacttgtcttcaaccagaacctcaacacttc
ctcgcttcggacggaaaaacatgcgacgtcgatgaatgcagcgttgacaacggtggttgc
agtcacaattgtaccaacactatcggatctttctattgttcttgtcccgaaggacaaacc
atcgttgccgatggcgttacatgcgatgtcgatgaatgtttggttgacaacggcggttgt
gaacaaggttgcatcaacaaacttggaggattcaactgtctttgtggaaacgaatatgag
gtggaaggtttcacttgtgatgacttcaatgaatgtgtcgatgagaacggaggctgcagc
caccagtgtgttgatctttcaccaggatatgaatgtgcttgcccggcgggtatgctgctc
gggccagacatgcagacttgcgaggtcgacagttgcgcagctttggttgccccattcgta
tgcgaccaaaactgccacaacattgtcggtggttcatacacttgttcatgcgacgatgga
tacattctagaagctgatggtcacaattgcacagaaatcaacgagtgtgacaacaacaac
ggtggttgtgaggaaatatgcgagaacacaccaggatcgtacaactgtgcctgcccaccc
gggttcggacttcgagacgatggtaaaacctgtggaattcaatgttatgcctgccagaat
gttctttctaatgaagaatgcggcgaacttgtggcttgcgctgtctcacaagacgcttgc
ttcactaccatgcgaaccagagacaacgtgacttcaatcaccaagggatgccaacaaaca
caagcttgtatcaacaacatggttcaaaacaaccgaaacatgggcgagggaccttcacag
tgcaacggaaacttgcagaactcgaaatgcgaatgttgttgcgttgagtccgcttgcaat
gctgatctttgcccatacgagatggacatcgctggatgcgaatccttcgtcaagaccgat
gttgttttcaccggtgaacgtcaagatggaagcattggaccagggggaatggctaaagtt
gaatgtgcaccaggttacacttttgcttcaaacaactccgcgcccgtccaactgaactgc
aactacaactatgccaacaacacagcggcttgggatggagattacaacgaacttgatgaa
tgcgtcgacgttgacgaatgcgccaacagcgagaacggcggtggatgcgcaaaccccgct
gtttgcgtcaaccttccaggaaccttcgaatgcgtttgcccagatgagccagatgatttc
gttcttattgatggatccatttgcgaacgtgatgaatgctccgaccctgatatgggcggt
tgctcgcataactgcaccaacacaatcggaagctacatgtgtttctgcccatcaggaatg
acactcattgaagatcaacttacatgcaacgtcgatgaatgccaagatgccaacggtgga
tgtcaacaaacatgcgtcaacacacttgatggttacagatgcgaatgcggacaaggtttg
gaactaaacgctgatcttcacacttgtgatgacatcaatgaatgtttgatcaacaacggt
gaatgttcacacaactgcacaaacttggtgcccggatacgaatgttcttgcccagagaac
atgatcttgaacggcgatggcttcacttgccgagtcaacccatgctacaccaacaacggt
ggatgtggtggtgtctgtactccattggaagttggatttcaatgttcatgcccacaagga
tacgacctccttgaagatggaagttgtttggacatcaatgaatgtgagaacaacaacggt
ggttgccaatacaactgtaccaacaccgatggaagctacgtatgctcatgcccagttggt
caaggtcttcacggcaatggcaggacctgcggtcgtgcatgttaccactgtaacggtgcc
agcaccaacgacgaatgcaacgccatgccaatccagatctgcactgatgacgcccaatct
tgcgagaacgaagtccgaatcaacgctggtgtgaaacaaatcttcaagggttgcaaacaa
acacaagcttgcaacaacaactatatccagaacccaaggagcgcattcgagccttcacaa
tgcaacggcaacctcggtaacgacgtgtgcagatgttgttgtgcaggacatctttgtaac
ttcaacgagaaaccatgccaagcaccacaagcatgccatatcagaaaggccgatgtcgcg
atcgtcgtcgactcctccagttccgtgaaatacaataacttccagaagatgaaatctttt
acatccagtttgttccaatctttcaaacttggtgacgaccgtgttcgagcagctcttgtc
agatacaaccgacgtgttgatcaacgattcgggttcgccgataccaacaccaaggaagaa
gtccaagatggagttgacgccatgccatacagaggaggtggtaccctcacaggacaagcc
cttcaacacgtcattgacaatacattgaagacagagaatggagccagagatgacgcacaa
aagatcgtcatcaccatcactgacggaagatcccaggacgatgtacttacaccaagccga
gcccttcgtgctgctggagtcatcacattcggaatcggaatcggagcccgagtccttgag
acccaaatcaacgagattggaggcgatccatcccgaaccttcagcgttgaaacattcgac
caacttagcgggttggtgttgaaccgagtacgagaggcagtttgttatgatgtgaatgaa
tgcaacaccaacaacggaggatgcagcgacacttgtgtcaacacagccggttcattccac
tgtgcttgccaagatggattcattctttcagatgatctttctacttgcatcacaaactcc
actggtgctcgtgccagcttcgacgaatgctctgttaacaacggtggatgcagtgatggt
tgtaccgatactttggtaggattcaactgcacttgccctgtaggatttgttctgatgagt
gacatgcttacttgcacagacgccgacgaatgcttgacggccgcttgctcgcatagttgc
gtcaacacaccaggaagttacttctgtgagtgcccacctgaccattacatggcagaagac
aagatcacatgtgaaccacgagcatcagtcgccgattgtgccgccggtttcttgcccaaa
ggacacagctgtacccaacaaagcagtgacatgatggcctacgtaccagcagaggaagca
tgcgcagccgctggaggtcgccttatgaagatcgctgattatggagttaagcagatcatg
tcaaggaactatcaaggagctaattggttcggtctcaccgatcgctcagaagaaggggtg
tgggtaaactcagatggaacagccttggaatacgaagaaggatgggcatccaaccaacca
ggagttggcgattgtgggagtttggaacactacgctttctactccaagctttgctcacga
gagatgaaatatatctgtgaacaatcacgagctgaagggttggtcatattcgacaggaca
tggcccaacggtgcacaagccaaactttacttccctaccgatgttaacgctgtgaagatc
actttcccacaaccagtcattcgagtgaacgcttggttttcacaagtcgctcaacaactt
tcgtccaccgagttcgtgatctcacagaacgacatccatcgtcaaagcagccacggtgag
ggacaattcaccgtcgatatgaatgaggttcgcttccccgactatgacatcacagtcaca
ccttacgagctgtaa
DBGET
integrated database retrieval system
