Ciona intestinalis (yellow sea squirt): 100182620
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Entry
100182620 CDS
T01056
Name
(RefSeq) NHP2-like protein 1
KO
K12845
U4/U6 small nuclear ribonucleoprotein SNU13
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin03008
Ribosome biogenesis in eukaryotes
cin03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100182620
09122 Translation
03008 Ribosome biogenesis in eukaryotes
100182620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cin03041
]
100182620
03009 Ribosome biogenesis [BR:
cin03009
]
100182620
Spliceosome [BR:
cin03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
100182620
Ribosome biogenesis [BR:
cin03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
100182620
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_L7Ae
RNase_P_pop3
PELOTA_1
Motif
Other DBs
NCBI-GeneID:
100182620
NCBI-ProteinID:
XP_002132097
Ensembl:
ENSCING00000021075
UniProt:
H2XLD8
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All DBs
Position
9:complement(4901472..4903444)
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AA seq
127 aa
AA seq
DB search
MDDEVNSKAYPLADAELTKTILDMIQQASNYKQLRKGANEATKTLNRGLSELIVLSADAE
PLEILLHLPLLCEDKNVPYVFVRSKQALGRACGVSRPVIAASVTSCEGSQLKSQIDSLRG
RIEKLLV
NT seq
384 nt
NT seq
+upstream
nt +downstream
nt
atggatgacgaagtaaacagcaaggcttacccgctggcagatgctgagttgacgaaaacc
atccttgacatgatacagcaagcttcaaactataaacaactgaggaaaggagctaatgaa
gcaaccaagacattgaaccgtgggttgtccgaactcatcgtgttgtctgctgatgccgaa
cctttggaaatattgctacatctgcctctcctgtgtgaggataaaaatgttccgtacgtt
tttgtacgctccaagcaagcgctgggcagagcatgcggggtatcgcgacctgtgatagca
gcttctgtgacatcatgcgaaggttctcagttgaaatcgcaaatagattctcttcgtgga
aggattgaaaagttgctcgtttaa
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