Ciona intestinalis (yellow sea squirt): 100183800
Help
Entry
100183800 CDS
T01056
Name
(RefSeq) exonuclease 3'-5' domain-containing protein 2-like isoform X1
KO
K20777
exonuclease 3'-5' domain-containing protein 2 [EC:
3.1.11.1
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cin03400
]
100183800
Enzymes [BR:
cin01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
100183800
DNA repair and recombination proteins [BR:
cin03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
100183800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RRXRR
CTD5
Zona_pellucida
Motif
Other DBs
NCBI-GeneID:
100183800
NCBI-ProteinID:
XP_026694356
Ensembl:
ENSCING00000016481
LinkDB
All DBs
Position
Unknown
AA seq
572 aa
AA seq
DB search
MLNHKQITIIGGIAVACVAAGTTILCYSYKKNQTRKSVINLSDLWPYNISSKDQDGTTFL
LSCPEDLETVLDRFVQELQYAKVIGFDCEWTSKSGKPQPVALLQLATVSGVCLLIRLSHY
RGPLPVRLQSILSDASYIKVGVGPMEDANKLLHDYGIVVSGCVDLRSLAVRTKETKNSLG
LKGLAQSYLGVTMNKQKHIQCSAWDAPSLSQEQIDYAANDALIAAKVFSVIARSKLESNV
HVASALNNAVNNTLWSIVSSYCQGLVDCKFKQRNQSHKQNNSQNVGNNFNFKPFKLYSTR
KQPLYDNCKLQAPDGQLLATCDRKKANWYIEKELADIVTETPFTIRLRFEPAGRPASDRD
YYLYDKQNVCVVCGSNGAIVRKNVVPHEYRRHFPLLLKDHVSHDIVPLCVACHQRAGYYD
NILRNQIADEYKAPLGSAQAVQMLEDPERRSVRSAGKALDNARDRIPEPRKGGLEKVLMD
YYQVTSLSEELIKEASILETRYHNEAYIPHGFKVIDTIQSENSLHGLIDFEKRWREHFLA
TMNPQHLPHLWSVEHNHDRVIDASDVAPEKQQ
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgcttaatcataaacagattactatcattggtggaattgccgtcgcttgcgtggctgca
gggacaacgatattgtgttattcctacaagaaaaaccaaacgagaaaaagtgtcattaat
ctaagtgatttatggccttacaatatatcaagcaaagatcaagatggtacaacattttta
ttatcttgcccagaagaccttgaaacagttttagatcgttttgtgcaggaattacaatat
gccaaagtgattggttttgattgtgaatggacatctaaatcaggaaaacctcaaccagtt
gcattgcttcaacttgctactgtatctggtgtttgcttattaataagattgtctcactac
cgcggtccattacctgttcgtctgcaaagcattctaagtgatgcaagttatattaaggtt
ggggttggtccaatggaagatgcaaataagttgttgcatgattatggaatagttgtgtct
ggttgtgttgatttacgaagcttggctgtgaggaccaaagaaactaaaaactctctggga
ttgaaaggtcttgcgcaatcatatttaggggtgaccatgaacaagcaaaaacatattcag
tgtagcgcatgggatgctccaagtttatcacaagaacagattgattatgctgcgaatgat
gctcttattgctgcaaaggtgttttctgtcatagcacgttctaaacttgaaagcaacgtt
cacgtggcatctgcattaaataatgccgtgaacaacacattgtggtcaattgtttccagt
tattgccaaggattagtggattgcaagttcaaacagaggaaccaatctcataaacagaat
aattcacaaaatgttggcaacaattttaactttaaaccgtttaagttgtactcaacaaga
aaacaaccactttatgataactgcaagctacaagctcctgatggacaacttttagcaaca
tgtgatagaaaaaaagcaaattggtacattgaaaaagaattagcagatatagtcacagaa
acaccatttacaattcggctacgttttgaacccgctggtcgaccagcatcagatagagat
tactatctttatgacaagcagaatgtttgtgtagtttgtggatctaatggtgcaattgtg
aggaagaatgttgtacctcatgaatacagaagacactttcctttgttattaaaagaccac
gtgtcgcatgatattgtaccactgtgtgtagcttgtcatcagagagctggatattacgat
aacattcttcgaaaccaaattgctgatgaatataaagctcctttaggctcagcacaagca
gttcaaatgttggaagatcccgaacgaagatctgtgagatctgcaggcaaagcactggat
aatgcaagagatagaattccagaaccacggaaaggtgggttagaaaaggtccttatggac
tactatcaagtcaccagcttatccgaggaacttatcaaagaagcatcaatacttgaaaca
aggtatcataacgaagcatatattccacatggatttaaggtgattgatacgattcaaagt
gaaaacagcttgcatggcttgattgattttgagaaaagatggagagaacacttccttgcg
acgatgaatccacaacatcttcctcatctttggtctgtggagcataaccatgatcgggtc
attgatgcgtcagatgtggccccagaaaaacagcaataa
DBGET
integrated database retrieval system
