KEGG   Ciona intestinalis (yellow sea squirt): 100183894
Entry
100183894         CDS       T01056                                 
Name
(RefSeq) actin, cytoplasmic-like
  KO
K05692  actin beta/gamma 1
Organism
cin  Ciona intestinalis (yellow sea squirt)
Pathway
cin03082  ATP-dependent chromatin remodeling
cin04145  Phagosome
cin04517  IgSF CAM signaling
cin04518  Integrin signaling
cin04519  Cadherin signaling
cin04814  Motor proteins
cin04820  Cytoskeleton in muscle cells
cin05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:cin00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    100183894
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    100183894
   04518 Integrin signaling
    100183894
   04519 Cadherin signaling
    100183894
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    100183894
  09142 Cell motility
   04814 Motor proteins
    100183894
   04820 Cytoskeleton in muscle cells
    100183894
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    100183894
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cin03021]
    100183894
   03019 Messenger RNA biogenesis [BR:cin03019]
    100183894
   03036 Chromosome and associated proteins [BR:cin03036]
    100183894
   03029 Mitochondrial biogenesis [BR:cin03029]
    100183894
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:cin04812]
    100183894
   04147 Exosome [BR:cin04147]
    100183894
Transcription machinery [BR:cin03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     100183894
Messenger RNA biogenesis [BR:cin03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     100183894
Chromosome and associated proteins [BR:cin03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TIP60 complex
     100183894
    NuA4 complex
     100183894
  Chromatin remodeling factors
   BAF complex
    100183894
   PBAF complex
    100183894
   GBAF(ncBAF) complex
    100183894
   SWR1 complex
    100183894
Mitochondrial biogenesis [BR:cin03029]
 Mitochondrial quality control factors
  Mitochondrial dynamics
   Actin cytoskeleton organization
    100183894
Cytoskeleton proteins [BR:cin04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actins
    Actins
     100183894
Exosome [BR:cin04147]
 Exosomal proteins
  Proteins found in most exosomes
   100183894
SSDB
Motif
Pfam: Actin
Other DBs
NCBI-GeneID: 100183894
NCBI-ProteinID: XP_002128924
LinkDB
Position
Unknown
AA seq 375 aa
MSGYPQTLVIDNGSGMCKAGFAGDNAPRAVFPSVVGRPRHQGVLVGMGQKDSYVGDEAQS
KRGILTLYRPIEHGIVTNWENMEKIWHHTFHNELRVAPHEHPVLLTQAPLNPKANQERMA
KIMFESFNTPAMYSAIQAVLSMYASGRTTGIVFDSGDGVSHTVPINEGYALPHAITRVDL
AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDYDQELQTVASGSSLDKSY
KLPDGQVITIGNERFRCPETYFQPSFIGMESPGIHETTYTSIMKCDVYIRNTMYANTVLS
GGSTLFPGIADRMKKEVTALAPPNTEVQIIAPPGRKYSSWTGGSILASLSTFQQMWISKQ
EYDEYGPSIVHRKFF
NT seq 1128 nt   +upstreamnt  +downstreamnt
atgagcgggtacccccagacactcgtaatcgacaatggatctggtatgtgcaaggccggt
ttcgccggagacaacgcaccgcgtgccgtcttcccatccgtcgtaggacgaccccgtcac
cagggcgttctagtcggtatgggacaaaaagattcctatgttggagacgaagcccagagc
aagagaggaatcctcactctctatcgtccaattgagcacggtattgttaccaactgggaa
aacatggaaaagatttggcatcacactttccacaacgaactccgtgtcgcaccacatgag
caccctgttctccttactcaggccccacttaacccaaaggctaaccaagaaagaatggcc
aaaatcatgttcgaaagcttcaacacccccgccatgtactccgctatccaggctgtgctt
tcaatgtacgcttctggtcgtaccaccggtatcgttttcgacagtggtgatggtgtttcc
cacaccgtcccaatcaatgagggttacgcccttccccacgcaattactcgtgttgactta
gccggtcgagatcttaccgattacttgatgaagatcttgaccgagagaggttattccttt
accaccaccgccgagcgtgaaatcgttcgtgacatcaaggaaaaactttgctatgttgct
ctggactacgatcaagaattgcaaactgttgccagcggcagctcactcgacaagagctac
aaacttcctgacggacaggttattacaattggcaatgagcgatttcgttgcccggaaaca
tatttccaaccctcctttattggtatggaatctcctggtatccacgagactacctacacc
tccatcatgaagtgcgatgtttacatccgtaacactatgtacgctaacactgttctttct
ggaggttccaccttgtttcctgggatcgccgacagaatgaaaaaggaagtcacggctctt
gcgccacccaatacggaagtccagatcattgccccaccaggaagaaagtactcttcttgg
actggaggatccatccttgcttcactctccaccttccaacagatgtggatcagcaaacaa
gaatacgacgagtacggcccatccattgtccaccgcaaatttttttaa

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