Ciona intestinalis (yellow sea squirt): 100183894
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Entry
100183894 CDS
T01056
Name
(RefSeq) actin, cytoplasmic-like
KO
K05692
actin beta/gamma 1
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin03082
ATP-dependent chromatin remodeling
cin04145
Phagosome
cin04517
IgSF CAM signaling
cin04518
Integrin signaling
cin04519
Cadherin signaling
cin04814
Motor proteins
cin04820
Cytoskeleton in muscle cells
cin05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100183894
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
100183894
04518 Integrin signaling
100183894
04519 Cadherin signaling
100183894
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
100183894
09142 Cell motility
04814 Motor proteins
100183894
04820 Cytoskeleton in muscle cells
100183894
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
100183894
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cin03021
]
100183894
03019 Messenger RNA biogenesis [BR:
cin03019
]
100183894
03036 Chromosome and associated proteins [BR:
cin03036
]
100183894
03029 Mitochondrial biogenesis [BR:
cin03029
]
100183894
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cin04812
]
100183894
04147 Exosome [BR:
cin04147
]
100183894
Transcription machinery [BR:
cin03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
100183894
Messenger RNA biogenesis [BR:
cin03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
100183894
Chromosome and associated proteins [BR:
cin03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
100183894
NuA4 complex
100183894
Chromatin remodeling factors
BAF complex
100183894
PBAF complex
100183894
GBAF(ncBAF) complex
100183894
SWR1 complex
100183894
Mitochondrial biogenesis [BR:
cin03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Actin cytoskeleton organization
100183894
Cytoskeleton proteins [BR:
cin04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actins
Actins
100183894
Exosome [BR:
cin04147
]
Exosomal proteins
Proteins found in most exosomes
100183894
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Actin
Motif
Other DBs
NCBI-GeneID:
100183894
NCBI-ProteinID:
XP_002128924
LinkDB
All DBs
Position
Unknown
AA seq
375 aa
AA seq
DB search
MSGYPQTLVIDNGSGMCKAGFAGDNAPRAVFPSVVGRPRHQGVLVGMGQKDSYVGDEAQS
KRGILTLYRPIEHGIVTNWENMEKIWHHTFHNELRVAPHEHPVLLTQAPLNPKANQERMA
KIMFESFNTPAMYSAIQAVLSMYASGRTTGIVFDSGDGVSHTVPINEGYALPHAITRVDL
AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDYDQELQTVASGSSLDKSY
KLPDGQVITIGNERFRCPETYFQPSFIGMESPGIHETTYTSIMKCDVYIRNTMYANTVLS
GGSTLFPGIADRMKKEVTALAPPNTEVQIIAPPGRKYSSWTGGSILASLSTFQQMWISKQ
EYDEYGPSIVHRKFF
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgagcgggtacccccagacactcgtaatcgacaatggatctggtatgtgcaaggccggt
ttcgccggagacaacgcaccgcgtgccgtcttcccatccgtcgtaggacgaccccgtcac
cagggcgttctagtcggtatgggacaaaaagattcctatgttggagacgaagcccagagc
aagagaggaatcctcactctctatcgtccaattgagcacggtattgttaccaactgggaa
aacatggaaaagatttggcatcacactttccacaacgaactccgtgtcgcaccacatgag
caccctgttctccttactcaggccccacttaacccaaaggctaaccaagaaagaatggcc
aaaatcatgttcgaaagcttcaacacccccgccatgtactccgctatccaggctgtgctt
tcaatgtacgcttctggtcgtaccaccggtatcgttttcgacagtggtgatggtgtttcc
cacaccgtcccaatcaatgagggttacgcccttccccacgcaattactcgtgttgactta
gccggtcgagatcttaccgattacttgatgaagatcttgaccgagagaggttattccttt
accaccaccgccgagcgtgaaatcgttcgtgacatcaaggaaaaactttgctatgttgct
ctggactacgatcaagaattgcaaactgttgccagcggcagctcactcgacaagagctac
aaacttcctgacggacaggttattacaattggcaatgagcgatttcgttgcccggaaaca
tatttccaaccctcctttattggtatggaatctcctggtatccacgagactacctacacc
tccatcatgaagtgcgatgtttacatccgtaacactatgtacgctaacactgttctttct
ggaggttccaccttgtttcctgggatcgccgacagaatgaaaaaggaagtcacggctctt
gcgccacccaatacggaagtccagatcattgccccaccaggaagaaagtactcttcttgg
actggaggatccatccttgcttcactctccaccttccaacagatgtggatcagcaaacaa
gaatacgacgagtacggcccatccattgtccaccgcaaatttttttaa
DBGET
integrated database retrieval system