Ciona intestinalis (yellow sea squirt): 100184572
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Entry
100184572 CDS
T01056
Name
(RefSeq) alpha-(1,6)-fucosyltransferase-like
KO
K00717
glycoprotein 6-alpha-L-fucosyltransferase [EC:
2.4.1.68
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00510
N-Glycan biosynthesis
cin00513
Various types of N-glycan biosynthesis
cin00533
Glycosaminoglycan biosynthesis - keratan sulfate
cin01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
100184572
00513 Various types of N-glycan biosynthesis
100184572
00533 Glycosaminoglycan biosynthesis - keratan sulfate
100184572
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cin01003
]
100184572
Enzymes [BR:
cin01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.68 glycoprotein 6-alpha-L-fucosyltransferase
100184572
Glycosyltransferases [BR:
cin01003
]
Glycan extension
N-Glycan
100184572
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FUT8_N_cat
SH3_9
O-FucT
Fib_alpha
Relaxase_C
SH3_1
Motif
Other DBs
NCBI-GeneID:
100184572
NCBI-ProteinID:
XP_018669695
Ensembl:
ENSCING00000023413
LinkDB
All DBs
Position
11:2245456..2251101
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AA seq
543 aa
AA seq
DB search
MAGTTFKNIFSVLMVASFALLYIRQTTVNVWFEKQRLYVVGKFHVFPYASENETAVNSNL
SGQPPAENSKGGLIWRGATGLLYSSLSKALQLQELLSQDLTKIKQNPEKLGDLLSTLKRH
LNPLENSLVNDLITMQKNIDTNNNEIKKLNKLAQELIRKTQNPPDCRTAKKLHCDLRRTC
GFGCLFHHYGICLFVAIGTNRVMQVKWGNIRAYPGIPKTFRNISDTCINATGFEQAIEWK
SKGEKNSTSEDAEIVKLIIQKPRDRHTPFSPWTVPANFLPRIEAVHSNPMLWWIGQVQSY
LMRPQEWLLNDLETCKKEIGFDHPIVGVHIRRTDKISEAAYVDLSRYMVHAKNWFDRYAE
KNPNKSFKKRIYLATDEVNVTLEANERYPEYQFISGLPNASFHAAKRREEETVKYLLHDV
YLLRDCDYFVGTFSSNIGQMVYELRQALDRDTTFEAVSLDNTYLYIGQSTRYQKAIMNHI
GICQKFVDRKECEIDLRVGDRIKVNPKVNKGYMYGGRNMRTGRAGLYPAYKVRDIVTPAR
YPF
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggctggaactacattcaaaaatatcttttctgtgctaatggtggccagttttgcacta
ctgtacatccgacaaacaaccgttaacgtttggttcgaaaaacaacgtctttatgtcgtg
ggcaaatttcacgtgttcccatatgcgtcagaaaacgaaacggccgttaacagtaattta
tcaggacaaccgccagcagaaaacagcaaaggcgggctcatatggagaggggcgactggt
ttattgtacagttcgttgtcgaaagcactgcaattacaggaacttcttagtcaagatctg
acaaaaataaaacaaaatcctgaaaaactgggagatcttctttcaacgctaaagcgacat
ttaaatccgttggaaaactcacttgtgaacgatttgataacgatgcaaaagaacatagac
acaaacaacaacgaaataaaaaaactgaacaagttagcgcaagaactcattcgaaaaact
cagaacccgccagattgcaggacagcgaaaaagttgcactgtgacttgcgaagaacgtgc
ggattcggctgccttttccaccattatggaatctgtctgtttgtagctatcggtaccaat
agggttatgcaagttaaatgggggaatataagagcgtacccaggaattccaaagactttt
cgaaatataagcgatacttgtataaatgcgactggttttgaacaagcaatagaatggaaa
agcaaaggcgagaaaaactcgacttcagaagacgctgaaattgtcaaattaattatccag
aaacctagagacagacacacaccgttttcgccatggactgtacccgccaactttttgcca
cgcattgaagcagtacattctaaccccatgttatggtggataggacaagttcaaagctac
cttatgcgtcctcaagaatggctgctaaacgacttagaaacttgcaaaaaggaaatcggc
tttgatcatccaatagttggcgttcatataagacgtacggataagattagtgaagctgcc
tacgtcgatttatcaagatacatggtgcatgcgaagaactggtttgaccgttacgccgaa
aaaaatccgaacaaaagtttcaaaaaacgaatttatctcgctacagatgaagtaaatgtg
accctagaagcgaacgaaagatatcctgaataccaattcatcagcggtttgccgaacgcg
tcgtttcacgcagcgaaaagaagggaggaagaaacagtaaagtaccttctacacgatgtt
tatctgctcagagactgcgactattttgttgggacattttcgtcgaacattggtcaaatg
gtgtacgaattgcgacaagcgttagaccgagacactacattcgaagctgtcagtttggac
aatacgtacttatacatcgggcagagtacaagataccaaaaagctattatgaatcacatc
ggaatttgccaaaagtttgtcgaccgcaaagaatgcgaaattgatcttagagtaggggac
agaataaaagtcaacccgaaagtgaataaaggttacatgtatggcgggcggaatatgaga
accggacgggctggtttgtaccccgcttataaagtgagggacattgtaactccagcgcgc
tatccattttaa
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