KEGG   Ciona intestinalis (yellow sea squirt): 100184925
Entry
100184925         CDS       T01056                                 
Name
(RefSeq) sarcosine dehydrogenase, mitochondrial-like
  KO
K00314  sarcosine dehydrogenase [EC:1.5.8.3]
Organism
cin  Ciona intestinalis (yellow sea squirt)
Pathway
cin00260  Glycine, serine and threonine metabolism
cin00670  One carbon pool by folate
cin01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:cin00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    100184925
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    100184925
Enzymes [BR:cin01000]
 1. Oxidoreductases
  1.5  Acting on the CH-NH group of donors
   1.5.8  With a flavin or flavoprotein as acceptor
    1.5.8.3  sarcosine dehydrogenase
     100184925
SSDB
Motif
Pfam: DAO GCV_T FAO_M GCV_T_C Pyr_redox_3 FAD_binding_2 Thi4 NAD_binding_8 FAD_binding_3 Pyr_redox_2 GIDA FAD_oxidored Pyr_redox ThiF ETF Lycopene_cycl AlaDh_PNT_C NAD_binding_9 ApbA HI0933_like NAD_binding_7 Shikimate_DH
Other DBs
NCBI-GeneID: 100184925
NCBI-ProteinID: XP_002128931
Ensembl: ENSCING00000002067
LinkDB
Position
4:complement(2847899..2861166)
AA seq 929 aa
MSSLIRLHGLGSALRRKTHLAVSSFRSSSTYDDKITDIKEVPYDSSLHKTESDAADQARK
SGSVPAEADVVVIGGGSVGCSTAYHLAKMGVKNVVLLEKHKLTAGTTWHTAGLLWHLTSH
DLEMELIKHTRELMTEVLPEETGLETGWVHTGGLFTAYTQQRFDAYKEMTTLAKVFDIEA
HLLSPSEIKEVHPLVDISNLVGAAYSPQDGTMDPAGTCVTYTRAAAKYGAKILENCDVTS
IETSTDDYGIKRIASINTNYGPIKTKNIVNCTGVWAPYVGEMVGLNVPQLTYKHAYVVTE
PIEGVNKVPNLRDHDSSIYLKRQGDTLQIGGYESNPIHCEHVDKDFAFGLYDLDWDVFSR
HIENAFISVPEIEQSGIRSTVCGPESFTADSKPLLGESPEVRGFFYGSGFNSGGMMYGGG
AGRELANWVIYGKPSIDMFAWDIRRFPGMLLSNKSWLHQKTHEMYSKHYSIAFHHDQPLA
GRNARKDSLHQTLADRGCFFEEKHGWERPGYFMFEENGKPIKSHLLPYDYYGNYDNVKHD
NYKYDELLRKDYTFDFPGDVHKQLARESLTCRTSAAMFNTSYMGKLFLTGPDAATAARYL
FSRDVSAPGKLRPCTYTLMLNDEGGIESDLVVAKVPGLTGETEFYMTVGGATTEYCKGHL
SDRLSDLGIKCNVDDRTNDMGILSLQGPKSREILDALVQGGNIKKLKFSRWMSAEIAGCP
VLIMRISFVGELGYELHCDMQHMPKIYEAIMQDSDKHGICDSGYRAMESLSTEVGFHHWG
HSIRYDDNPLEARLMNLCDEGADYVGSDAINRLRGTNPNKILCCFTVDEPVQLFGHEAIW
RNDEIVGYTRNAVHGFALNKEVAFGYVNARKVGSSDDEAVLSGNYEVERMGKRYPAQVFA
SSPYLPTFNRMMGKYSDEDQQRLLARMNA
NT seq 2790 nt   +upstreamnt  +downstreamnt
atgtcatctttaataagacttcatgggcttggcagcgccctaagaagaaaaacacacttg
gcggtcagttcgtttcgttcgtcaagcacctacgatgataaaataactgacattaaagaa
gtgccctacgattcgtcccttcataaaactgaaagcgatgctgctgaccaagccaggaaa
tctggcagcgtgcctgctgaagcggacgtcgtggttataggcggtggaagcgtgggatgt
agtacagcttaccacctggccaaaatgggcgtgaagaacgtcgtgctgctggaaaaacac
aagctcactgcaggcacgacatggcacactgctggtttgctttggcacctaaccagccac
gatctggaaatggagcttataaaacacacacgggagctgatgactgaagttttgcctgaa
gagactggtctcgaaactggttgggtgcatactggtggtctattcacagcatacactcag
caacggttcgacgcgtataaggagatgactacgcttgccaaagtcttcgatattgaggct
catcttttatcgccgtctgagataaaggaggttcatccattggttgatatctccaattta
gttggtgctgcatatagccctcaagacgggacaatggacccagctggtacttgcgttacc
tacacaagggcagctgcaaagtacggggcgaagatcttagaaaactgcgatgttaccagc
attgaaacgagcacggacgactatggaataaaacgcatcgcttcaatcaacaccaactat
ggacccataaagacaaaaaacatagtcaactgtactggtgtatgggcaccctacgttggc
gagatggttggtctgaacgtcccacagttaacatacaaacacgcatatgtggttactgaa
ccaatagaaggagtaaacaaagtgccaaatcttcgcgaccatgatagttctatatacttg
aaacgtcaaggggatactcttcagataggtggctacgaatccaacccaattcactgcgag
catgttgacaaagacttcgctttcggtctatatgatttggactgggatgtatttagtcga
cacatcgaaaatgccttcatatctgttcctgagatcgagcagtctggtattcgatccacc
gtgtgtggtccagagtcctttactgctgattcgaaacctttgctgggcgagtcaccagaa
gtccgtggtttcttctatggaagtggattcaacagtggtggtatgatgtatggaggtgga
gctgggcgggaattagcaaactgggttatatatggaaaaccctcaatcgacatgtttgct
tgggatattaggcggtttccgggcatgctcctttcaaacaaaagctggcttcaccagaaa
acacacgagatgtattcaaaacattacagcattgcgtttcatcacgaccaaccgttggct
ggtagaaatgcgagaaaggattcgcttcaccagactttggccgaccgcggttgcttcttt
gaagaaaaacacggctgggaacgtcctggttactttatgtttgaggaaaacggcaagccc
atcaaatcccatctgctcccgtatgattactatggcaactatgataacgtgaaacacgac
aattataagtacgatgagttgctgaggaaagactacacgtttgattttccaggagacgta
cataaacagctcgctagagagtctctaacttgccgcacttctgctgctatgttcaatacc
agctacatgggtaagttgttcttaactgggcctgacgctgccaccgcagctcgttacctc
ttcagtcgtgacgtcagtgcccctggaaaactacgcccatgcacttatacgcttatgcta
aatgacgaagggggaattgaatcggatcttgtcgtcgcaaaagttccgggcttaacagga
gaaaccgagttttacatgacggttggtggtgctactactgaatactgcaaaggccacctc
agcgacaggttgtctgatcttgggataaaatgcaatgttgacgacagaactaatgacatg
ggtattctcagtcttcaaggtccaaaaagccgtgaaatccttgatgcgttagttcaaggg
ggcaatattaaaaaactgaagttcagccgctggatgtcagcagagatcgcaggatgtccc
gtccttataatgaggatttcttttgttggtgaactgggctatgaactgcattgtgatatg
caacacatgcctaagatatatgaagccattatgcaggactctgataaacatggtatttgc
gattcgggttaccgagccatggaatcattgagcacagaagttggtttccaccactggggt
cacagtattcgatacgatgacaacccattggaagctagactgatgaatctgtgtgatgaa
ggcgctgattacgtcgggagcgatgcaataaacagacttcgtggaactaacccgaataaa
atcctctgctgttttacggtggacgagccagttcaactattcggacacgaagcaatctgg
agaaatgatgaaatcgtcggttacaccaggaacgcggtccatggatttgcattgaacaaa
gaagtcgcattcggatatgttaatgcgagaaaagttggttcatctgatgacgaagcagtt
ttaagtggcaactacgaagttgaacgaatgggaaaacgatatcctgctcaagtattcgca
tcaagtccttatcttccaacttttaatagaatgatgggaaaatattcagatgaagaccaa
caacgactactagctcgaatgaatgcctaa

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