Ciona intestinalis (yellow sea squirt): 100185120
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Entry
100185120 CDS
T01056
Name
(RefSeq) exostosin-1-like
KO
K02366
glucuronyl/N-acetylglucosaminyl transferase EXT1 [EC:
2.4.1.224
2.4.1.225
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
cin01100
Metabolic pathways
Module
cin_M00059
Glycosaminoglycan biosynthesis, heparan sulfate backbone
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
100185120
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cin01003
]
100185120
Enzymes [BR:
cin01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.224 glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase
100185120
2.4.1.225 N-acetylglucosaminyl-proteoglycan 4-beta-glucuronosyltransferase
100185120
Glycosyltransferases [BR:
cin01003
]
Glycan extension
O-Glycan
100185120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_64
Exostosin_GT47
RXYLT1_C
Motif
Other DBs
NCBI-GeneID:
100185120
NCBI-ProteinID:
XP_002128024
Ensembl:
ENSCING00000006482
LinkDB
All DBs
Position
2:842827..852506
Genome browser
AA seq
766 aa
AA seq
DB search
MQANKRYGLLLSSLILITVIYNGYKWAHQYEADHFANDESKLLQMEKRSLPFDKNADRTK
HTALEMVPKQAVQNLLSYSEQDYYESNSEELVPSPTDRHASRTRIYKNRKCRMDTCFDLE
RCRRTGFKVYVYPDVGEKTSTNFQNILASLRASQYYTSDPEKACLFVPAYDTLDRDHLSA
DYIHNLGAKISRLKYWNNGKNHIIFNLYSGTWPEYLEDVGFNLGEAILAKASFGDNYYRH
GFDISFPLIGKTHPHMQGTQGFLKANYFPPRRKYLLSFKGKRYTYGIGSSTRNALYHIHN
GDDIIILTTCKHGKNWQSFSDQKCETDNEEYEKWDYQSLLHNSTFCMVPRGRRLGSFRFL
ESLQAACIPVVLANGWKLPFDEVIDWSKASLAWEERLLLQVPGILREVQDNRIMLLRQQS
QFLWDKYFSSMDVIIRSTLEIIHDRVFPEQARPAFAWNSQPGALYFNSDTAPSSYPFYHG
LLGVDAPMKFTAVIQATAPVTSSAAPIVKLLRNLVQSSSCNEIVVLWHCGKPPIPNDRWR
VLVPQDGAHEIPIRVIDDQPKTMGRRFLPRQFTTDAILSLDDDVMLNSQEIDFAFDVWRS
FPDRIVGFPARSHFWNSSKSKWVYTSKWSNSYSIVLTGAAFIHRYYLKLYSEWLPPSLRK
TVDETSNCEDILMNMLVAHVTRLPPVKVTQKKQYKDTSASQPYVNHAGVVSRWSDPRHFA
ERQTCMQSFEAWFGYMPLISSETRFDPSLYKDNVSVTRKKYPKIEI
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcaaataaaagatatggtctgctactatcatctttgattcttattactgttatc
tacaatggatacaagtgggcacatcagtatgaagctgaccactttgcaaatgatgaatca
aagttgctgcagatggaaaaacgaagtttgcctttcgataaaaatgcagacagaaccaaa
cacacagcactggagatggtgccaaagcaggccgtgcagaatttgctctcatattcagaa
caagactactatgaaagtaattcagaagaactggtgcccagtccaacagatcgacatgcc
tcaagaactagaatatacaaaaatcgaaaatgtcgaatggacacgtgctttgaccttgaa
aggtgtagaagaactggttttaaagtttatgtttatccagatgttggtgaaaaaacctca
acaaattttcaaaatattcttgcttcccttcgtgcgtcacaatactacacaagtgatcca
gagaaggcttgtctatttgttcccgcttatgatactttagacagagaccatctgtctgcg
gactatattcataaccttggtgccaaaatatctcgtttaaaatactggaacaatggaaaa
aatcatattatttttaacttatattcgggcacttggcctgaatacttagaagatgttggt
tttaaccttggcgaggcaatcctggccaaagcaagttttggtgacaactattatcgccat
ggttttgatatttcgtttcctttaattggaaaaactcaccctcatatgcaaggaacccaa
ggatttcttaaagcaaattattttcctccaagaagaaaatatcttctctcatttaaaggg
aaacgatacacatacgggattgggtcaagcacccgtaatgctttgtatcatatccacaat
ggtgatgacatcatcatattaacaacatgcaagcacggaaaaaactggcaaagtttcagc
gaccagaaatgtgagacagacaacgaggaatatgaaaaatgggactaccagtcattgctc
cacaattcaactttctgtatggtgccaagaggacgaagattaggttcgtttcgcttcctt
gaatctttgcaagcagcttgtatacctgttgtactcgctaatgggtggaaacttcccttt
gatgaggtcattgattggtcaaaagcgagtttagcttgggaggagcgattgctcttacag
gtacctggtatattacgggaagttcaagacaaccgcatcatgttactacgtcagcaaagt
caattcctatgggacaaatacttttcctcaatggacgtcataattcgaagcacactagag
ataatacatgaccgtgtgttccccgagcaagcacgaccagcatttgcatggaattctcaa
ccaggagctttatatttcaattctgataccgcgcccagctcatatccattttatcatgga
cttcttggtgttgatgctcccatgaaattcacggccgtgatacaagccaccgcacctgtg
acgtcatcagccgcacccatagttaaattgcttcgtaatttagttcaaagttcttcatgt
aatgagatcgtggtgttatggcattgcgggaaacctccgattcccaacgacagatggcgt
gtattggttccgcaagatggcgctcacgagataccgatacgagtaatagacgaccaacct
aaaacgatgggccgtcggttccttccgcgtcaattcaccacagatgcgatactaagtctt
gatgatgacgtcatgctgaattcacaagagatcgacttcgcattcgacgtatggcggtcg
tttcccgaccgtatcgtcggcttccctgcacgcagtcacttttggaactcaagtaaaagc
aaatgggtgtatacatcaaagtggtcgaatagctacagtatagttctaacaggggctgca
ttcatacacagatattacttgaaactttactcggagtggcttccaccgtcgctaaggaaa
acagtcgatgaaacgagtaattgtgaagatattttaatgaacatgttggtggctcacgtg
acaaggctaccaccggttaaagtcacccagaaaaagcaatacaaagacacttcagcgtcg
caaccgtatgtgaatcacgctggtgttgtgtcaaggtggtccgatcctcgacatttcgct
gaacgccagacctgcatgcagagtttcgaagcctggtttgggtatatgccccttatttct
tcggagactcgctttgatccttcactttacaaagataatgtttccgttacaagaaagaaa
tatccaaaaattgaaatttga
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