Ciona intestinalis (yellow sea squirt): 100185216
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Entry
100185216 CDS
T01056
Name
(RefSeq) selenocysteine lyase-like
KO
K01763
selenocysteine lyase [EC:
4.4.1.16
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00450
Selenocompound metabolism
cin01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
100185216
Enzymes [BR:
cin01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
100185216
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GFIT
Motif
Pfam:
Aminotran_5
YosH_C
Pns11_12
Motif
Other DBs
NCBI-GeneID:
100185216
NCBI-ProteinID:
XP_002129334
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All DBs
Position
1:complement(9186794..9191576)
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AA seq
390 aa
AA seq
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MVYLDYNATAPLADEVVEVITKSLTEGWGNPSSDHGPGRHAKQLISEARSNIADCIGCFA
SNIIFTSGGSEANNWVIQSVLSCHNGGEPHHKPHIVTSSVEHDSVLVPLIVLQQRGLIEL
TKVSVNHSSGEISCDDVIKEIKPNTVLVTVMMANNETGTIMPIKDIVRDIRTLEEKNNRK
ILIHTDAAQAIGKIGVNVGKLGVDFLTTVGHKFYGPRIGALYVKDVNALTPLIYGGGQEW
GLRAGTENTPMITGLGEAAKLVKDNLNFYADNMKLTRDYLEERLKKEFGSRITFNCKSNN
RLPNTCNFSFVGQGFEGYKVVKMAKSFTCSTGSACHASECLPSKVLLNFHIERNVAANAL
RLSTGRTTTIEDIDCVINELKSIFTNIQNT
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atggtatatttggattacaacgcaacagcgcctctagcggacgaagtggttgaagttata
acaaagtctttaactgagggttggggaaaccccagtagtgatcatgggccaggaaggcat
gcgaaacaactgatatccgaagcaagaagtaacatagccgactgtattggttgttttgca
tcaaacattatctttacatctggtggcagcgaggctaataactgggtgatacaatctgta
ttgtcatgtcataatggaggcgaaccgcatcataaaccacacattgttacatcttcagtt
gaacatgattcagtgttggttcctttgattgttttgcaacaaagaggattaatagagctt
accaaagtttctgtaaatcacagtagtggggaaataagttgtgatgatgtcattaaagag
atcaaaccaaacacagttcttgtcacggtcatgatggctaataatgaaactggaacaata
atgcccatcaaagacattgttcgtgatatacgaacattggaggaaaaaaataatcggaag
atattaatccacacggacgctgcacaagctattgggaagataggagttaatgttggaaaa
ttgggggtggatttcctcacaacagtcggccacaagttttatggaccaagaattggagct
ctttatgtgaaagatgtcaacgcattaactcctcttatatatggtggggggcaggagtgg
gggttgagggcagggaccgagaacacacccatgataaccgggctcggtgaagcagctaaa
ttagtaaaagataatttgaatttttacgctgataatatgaaactaacgagggattattta
gaagaaagactgaagaaagaatttggaagccgtataacttttaactgtaaatccaacaac
agattaccaaacacttgtaacttctcatttgttggtcaaggatttgaaggttacaaagta
gttaagatggccaagagcttcacatgcagtactggatctgcttgccatgcaagtgaatgt
ttgccttctaaggttttactcaactttcatattgaaagaaatgtggcagcaaatgcactt
cgtttatcaactggaagaacaacaactatagaagatattgattgtgtgattaatgaatta
aaatcaatatttacgaacatacaaaacacataa
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