Ciona intestinalis (yellow sea squirt): 100185960
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Entry
100185960 CDS
T01056
Name
(RefSeq) beta-1,4-galactosyltransferase 1
KO
K07966
beta-1,4-galactosyltransferase 1 [EC:
2.4.1.22
2.4.1.90
2.4.1.38
2.4.1.-]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00052
Galactose metabolism
cin00510
N-Glycan biosynthesis
cin00513
Various types of N-glycan biosynthesis
cin00514
Other types of O-glycan biosynthesis
cin00515
Mannose type O-glycan biosynthesis
cin00533
Glycosaminoglycan biosynthesis - keratan sulfate
cin00601
Glycosphingolipid biosynthesis - lacto and neolacto series
cin01100
Metabolic pathways
Module
cin_M00071
Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
100185960
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
100185960
00513 Various types of N-glycan biosynthesis
100185960
00515 Mannose type O-glycan biosynthesis
100185960
00514 Other types of O-glycan biosynthesis
100185960
00533 Glycosaminoglycan biosynthesis - keratan sulfate
100185960
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
100185960
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cin01003
]
100185960
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cin04131
]
100185960
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cin04147
]
100185960
Enzymes [BR:
cin01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.22 lactose synthase
100185960
2.4.1.38 beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase
100185960
2.4.1.90 N-acetyllactosamine synthase
100185960
Glycosyltransferases [BR:
cin01003
]
Glycan extension
Type 2 chain/Poly-N-acetyllactosamine
100185960
Membrane trafficking [BR:
cin04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
100185960
Exosome [BR:
cin04147
]
Exosomal proteins
Exosomal proteins of breast milk
100185960
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_transf_7N
Glyco_transf_7C
CHGN
Motif
Other DBs
NCBI-GeneID:
100185960
NCBI-ProteinID:
XP_002125920
Ensembl:
ENSCING00000003723
UniProt:
F6WUK5
LinkDB
All DBs
Position
7:complement(150192..154068)
Genome browser
AA seq
372 aa
AA seq
DB search
MNWMRANPQMLLIVVMMSGSFIILAHFSLFRNKVIQRFMHASRGNIQKQVVIEESPYIKR
NKIMNRESLARILRLNFEQKNETKPTSRKCHVAYAKLKGYISLHLMTEETNQTTSSGLTW
PPTLKYLDFIYKDLEHGGVYKGPKECKCATNFAIIVPFRDREQHLRFFLFYIHPLLQRQR
TCYTIIVVEQDDDKTFNKGKMMNSGFLYANSIGDFDCYIFHDVDMIAENDRNIYQCKEKK
VAHLVWQMDKYDYEIPYYDYIGGVLAFTKEQFITVNGFSTMYEGWGGEDDDMMKRIWAKG
YELWRPRKKNIARFKMIHHNHDKRNPRIDDYLMQDLLFSAISRQDSDGLNSLHTVRTDVI
KYPSHTRVKVRS
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgaattggatgcgggcaaatccacaaatgctacttatagtagttatgatgagcggtagt
ttcataattctggcacattttagtttgttcagaaacaaagttattcaacgttttatgcat
gccagtcgaggtaacatacagaagcaagttgtaattgaagaatcgccatacataaaacgt
aacaaaattatgaatcgtgaatctcttgctcgaatacttcgcttgaattttgaacaaaaa
aatgaaacaaaacccacgtctaggaaatgccatgttgcttacgccaagttgaagggatat
atatcattacatttaatgacagaagaaaccaaccaaacgacatcatcggggttaacatgg
ccgccaacgttaaaatatctggactttatatacaaggacttggagcatggtggtgtgtac
aaaggacccaaggaatgtaaatgtgcaactaactttgctattattgtcccttttcgtgac
agagaacaacatttaaggtttttcttattttacatccaccctcttcttcagcgacaacga
acctgttacacaattattgtggttgagcaagatgacgacaaaactttcaataaagggaaa
atgatgaacagtggttttctctatgcaaacagcatcggtgattttgattgctatattttt
cacgatgtcgatatgattgcagagaacgaccgaaatatttaccaatgcaaagagaaaaaa
gttgcgcatttagtctggcaaatggacaaatatgactatgagattccctactatgattat
atcggtggtgtgttggcatttaccaaggaacaattcattacagtgaacggtttctccacc
atgtacgagggatggggaggtgaagacgacgatatgatgaagcgaatatgggcgaaaggt
tacgaactttggagaccgagaaaaaagaacatcgccagattcaaaatgattcatcacaac
cacgacaaaaggaatccccgtatagatgattatctgatgcaagatttgttattctcagca
ataagtcgtcaagacagcgatggtttaaattctcttcatacagttcgcactgatgtcatt
aaatatccgagtcacaccagagtaaaagttagaagttga
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