Ciona intestinalis (yellow sea squirt): 100186262
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Entry
100186262 CDS
T01056
Name
(RefSeq) SH3 domain-containing kinase-binding protein 1 isoform X1
KO
K12470
SH3 domain-containing kinase-binding protein 1
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
100186262
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cin04131
]
100186262
Membrane trafficking [BR:
cin04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
100186262
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
100186262
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH3_9
SH3_1
SH3_2
Tmemb_cc2
DUF3104
DUF2383
Motif
Other DBs
NCBI-GeneID:
100186262
NCBI-ProteinID:
XP_009860523
LinkDB
All DBs
Position
12:complement(4268623..4284035)
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AA seq
704 aa
AA seq
DB search
MATMKGIVQFDYEAEAPDELTLRVGDVIINIKNVEEGWCQGTLAGKVGMFPDNFVKIIEE
PVVKSPVPTKKTKEVLRRVKVTFDYEPINEDELHLVTGEIVDVYHDEEEGWARGGVNGKE
GVFPTNFTTVVTETQSNETPPPKPEESHGSKKVKGVGFGNIFGDGPIKLRSSIVDGEGGG
TGKITASARQQKVEKSQPKVEVPKVDKSSVKNEKPAAKVEKSVKNADKVPLVPPQAKKPA
VEKCRAMFDYSAENDDELTLVKGDIVIILDKVSQDVGWWEGEIVDENGKRRKGVFPDNFV
TPLPTVDEDTSSEETSSKDSLDIKTETKATKQKTVVEEEKVVSSKTKTPPLTSKSTNSLK
RPAPQVPPIASQSNKPETSYDETDSILPNAHEEPKLTHYKRPGGPKNRRKPDTTGRRERA
KESAEEMLPVPDTPTETEPVDLEPTEPTPPPKKDTKRGIQVMPVLGAEGGTGDTPSWLKN
LKHRSSQKKPTSGMAVSPNKEEEPAQETPNWRNNLKKTTKQPLQPPKPTPQATSPKPVTS
PMVPKQSAIVTSPHTNHAPLSPKEEEKSPHWKSVRSKPDPDTHQNETEVDKPSKVIDAKK
PIKPMIPFQPKMPDPSAKKAPPSAAKPKPPPPKSKPMIPPSKPVTSNASMEEMKEDIKLL
KDSFNTMQSEHRREVTRLKEALEEEKKLRIKLQDDLAALQMRLG
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atggctacaatgaaaggtatcgtccagtttgattatgaagcagaagcaccagatgaatta
actctaagagttggtgatgtaatcataaatataaagaatgtagaggagggatggtgccag
gggactttggcaggaaaagttggcatgtttcctgataattttgtaaagattattgaagaa
ccggtagtgaaatctccagtaccaacaaagaaaacaaaagaagttctaagaagagtgaaa
gtaacttttgattacgagccaataaatgaggatgaattacatcttgtgacaggagaaatt
gtagatgtttatcatgatgaagaagagggttgggctcggggtggggtgaatggaaaagaa
ggtgttttccccactaatttcaccactgtggtaactgaaacacaatctaatgagacacca
ccacctaagcctgaggaaagccatggatcaaaaaaggttaagggcgttgggtttggaaat
atattcggagatggaccaataaagctgaggtcgtccattgtagatggagaagggggagga
actgggaagattactgcatccgcacgccagcaaaaggtggaaaagtctcagcccaaagta
gaagttcctaaagttgataaatcttctgttaagaatgaaaaacctgctgcaaaagtggaa
aaaagtgttaaaaatgcagataaagtgccgttagtaccaccacaggctaagaaacctgct
gttgaaaagtgccgagcaatgtttgattactcagcagaaaatgacgacgaattaacgtta
gtaaaaggtgacatcgtgattattcttgataaagtaagccaagatgttggttggtgggaa
ggggaaattgttgacgaaaatggaaaaaggagaaaaggagtttttcctgataattttgtc
accccacttcccacagtagatgaagatacaagttctgaggagacttcatcaaaagatagt
cttgacataaaaactgaaactaaagctacaaaacagaagaccgttgttgaagaagaaaaa
gttgtgtcttcgaagaccaagactccgccattgacatcgaaatccaccaattcattgaag
cggccggcaccacaggttccacctatagcaagtcaatctaacaagccagagaccagctat
gatgaaacagattctattctgcccaatgcacacgaggaaccgaaactaacccactacaag
cggccaggtgggccaaagaaccggcgtaaaccggatacaaccggcagaagagagagggct
aaagagagcgcagaagaaatgcttcctgtccccgacactccaacagaaacggaacccgtg
gatctagaaccaacggaacccaccccgccccctaaaaaagacacaaaacggggcatccaa
gtcatgcccgtattgggtgcggaaggtgggacaggagacaccccttcgtggctcaaaaac
ctaaaacatcgaagctcacagaagaaaccaacgtctggtatggctgtttcccctaacaag
gaagaagagccggcccaggagactcctaactggagaaacaacttgaaaaaaacaaccaag
cagcccctccagccccccaaacccaccccacaagccacatcacccaaacctgttacatcc
cccatggtgccaaaacaaagtgcaattgtaacttcaccccacacaaaccatgctcctctg
agtcctaaagaagaagagaagtcacctcattggaagtcagtccggagcaaaccggacccg
gacacacatcagaacgaaacagaggtggataaacctagcaaagtaattgatgctaagaag
ccaataaagccaatgataccattccagccaaagatgccggatccttcggctaaaaaggct
cctcctagtgcggcgaaaccaaagcctccccctccgaaatcgaaaccgatgatcccacca
tcaaaacctgtaacatccaatgcttcaatggaagagatgaaggaagatatcaaacttctg
aaagattccttcaataccatgcaaagtgaacacaggagagaagtcacaaggttgaaggaa
gcgctggaagaagagaaaaaacttcgaattaaacttcaggatgatcttgcagcacttcag
atgcgacttggttga
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