Ciona intestinalis (yellow sea squirt): 100186563
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Entry
100186563 CDS
T01056
Name
(RefSeq) sphingomyelin phosphodiesterase
KO
K12350
sphingomyelin phosphodiesterase [EC:
3.1.4.12
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00600
Sphingolipid metabolism
cin01100
Metabolic pathways
cin04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
100186563
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
100186563
Enzymes [BR:
cin01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.12 sphingomyelin phosphodiesterase
100186563
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SapB_1
Motif
Other DBs
NCBI-GeneID:
100186563
NCBI-ProteinID:
XP_002123913
LinkDB
All DBs
Position
Unknown
AA seq
460 aa
AA seq
DB search
MKYLLLATLLVLYLAALAETSVVDRKLRVQQFEKDSDVTEDYELKRKVGLLFLRKILGQG
DILRPEKEKELDRLVEQSGMTCTLCKAGVDVIQKLLHSNGGEDVITAIAVEVCELGNIED
RRVCKLAVEEFKQEVFYVLFNLQPDELCYWLLKNQCRKPADFLPNWVVTSSTTPQPPYKP
RTNPASGTPTLKFLFFTDMHMDVRYAPGRTAKCREPLCCRDNDALPDQESDAAGMWGDYR
HCDMPQNTVESMMSQVANNDGIDFIIFTGDIPAHNVWNQTKEDQIDKLQRWTDLLKKHFP
TTPVYAAVGNHESAPVNSYPPHSIFDQPGADTQWLLDTLYDSWSNWIPEEDMGFVKQGAF
YTTLIRPGLRVVSLNTNYCSDDSWWLLVGTNAVDPEGQLKWFAGVMQAAEDNDENVLIIS
HRPTDGCMKPWSDNYYEIINRYQNTIIAQLFGHAHTDEMM
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgaagtatttattgctggcaacactgctggttttgtatctggcagcactggcggaaaca
tctgtcgtggaccggaagttacgcgtgcagcaattcgagaaggatagtgacgtcacagag
gattatgaattaaagaggaaagttggtctattgttccttcgcaaaatacttggtcaaggc
gacatcttgcggccggagaaggagaaggaactcgaccgcttggtggagcagtcgggtatg
acgtgtacattgtgtaaggctggtgttgacgtcatacaaaagctgttgcatagcaacggg
ggtgaagacgtcatcactgctattgctgtggaagtatgcgagttgggtaatatcgaagac
cgacgagtttgcaagttagctgtggaggaattcaagcaagaagttttctatgttttgttt
aatcttcaaccagatgagctctgctattggttgttgaaaaatcaatgtcgaaagcccgcc
gatttcctccccaactgggtagtgacatcatcaacgaccccccagcccccgtataaacct
cgtacgaaccccgctagcggaacccccaccttaaagttcttgttcttcactgatatgcac
atggacgtacgatacgcacccgggaggacggctaagtgtcgcgaacctttgtgttgtcgt
gacaacgatgcacttcctgatcaagaaagcgacgcagctggtatgtggggcgattatagg
cattgtgacatgccacaaaacacagtggagagtatgatgtcacaagtggcgaacaatgat
ggtattgacttcattatattcacaggtgatattccagcacataatgtttggaatcaaacg
aaagaagatcaaatcgataaattacaacgatggaccgatttattgaaaaaacatttccca
actaccccagtgtatgctgcggttggcaaccacgagagcgcccccgtcaactcgtaccct
ccccactcgatattcgatcaacccggtgctgacacccagtggttgctcgatacattatac
gactcatggtcgaactggatccccgaggaagacatggggtttgttaaacagggggctttc
tacacgaccctcattcgaccggggttacgggtggtttccctcaacaccaattattgtagc
gatgattcatggtggttgttggttggtacgaacgctgttgaccctgaaggacaacttaag
tggttcgccggtgtaatgcaagcggcggaggacaacgacgagaacgtgttaataatttct
catcgaccgaccgacgggtgcatgaagccgtggagcgataactattatgaaatcatcaat
cgataccagaacaccattattgcgcaattgttcggacacgcacacacggatgaaatgatg
taa
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