Ciona intestinalis (yellow sea squirt): 100187404
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Entry
100187404 CDS
T01056
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
100187404
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cin01007
]
100187404
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cin03016
]
100187404
Enzymes [BR:
cin01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
100187404
Amino acid related enzymes [BR:
cin01007
]
Aminoacyl-tRNA synthetase
Class I (U)
100187404
Transfer RNA biogenesis [BR:
cin03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
100187404
Prokaryotic type
Other AARSs
100187404
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
100187404
NCBI-ProteinID:
XP_026690541
Ensembl:
ENSCING00000002466
LinkDB
All DBs
Position
5:1769796..1782980
Genome browser
AA seq
1111 aa
AA seq
DB search
MVEPVPEKLDFPKEEEKILAIWKEIDAFKTSLKQSKGKPRYAFYDGPPFATGLPHYGHIL
AGTIKDIVTRFAHQSGFHVDRKFGWDCHGLPVEYEIDKSLGIKGPEDVAKIGIAEYNRQC
RSIVMRYASQWELIVNRLGRWIDFENDYKTLYPWFMESVWWVFKQLFDKGFVYRGFKVMP
FSTGCHTPLSNFEANQNYKDVNDPAVIISFPLVKDPNVKLIAWTTTPWTLPSNLALCVNP
KMTYVKVEDQATGSVYILMEARLVALYKNESEYKVIEKMVGSALFGLKYIPVFNYFESLK
ETAFKVLTDTYVTDDSGTGVVHQAPYFGADDYRVCLANNVFKKDGIPICPVDASGKFTSD
VTDFQGMYVKDADKHICKHLKQNNRLVHQSTTKHNYPFCWRSDTPLIYKAVPSWFIRVEN
ITDKLLENNAQCYWVPDFIKEKRFANWLRDAHDWAVSRNRYWGTPIPIWVSEDLEEIVCI
GSIDELAQLSGVRVTDLHRESVDDITIPSRMGKGVLRRIPEVFDCWFESGAMPYAQLHYP
FENKKEFEEGFPADFIAEGIDQTRGWFYTLLVLSTGLFGKPPFKNLIVNGLVLASDGQKM
SKRKKNYPDPMEIISQYGADALRLYLINSPVVRAENLRFQSNGVRDILKDVFLPWYNAYR
FLIQNIIRLEKEESATFSYKDEDLGSSSNIMDQWILSSMQSLLQFVKQEMHGYKLYTVVP
KLVRFVELLTNWYVRSNRKRLKGDGGLEDCQKALQTLFSVIFTITRTMAPFTPFLTEQMY
QNLRRIIPHLQSDDCRSIHYLMLPQPKESLINVKIEKAVSRMQTVIELARVIRDRKTMPT
KYPLPELVVIHKDPEYLADVVSLQSYVTDELNVRNVTTSSDKVKYGVKLRAEPDHVALGK
RLKGDFKKMMAAIQKLTDVQVEDFISSGSIQLMGHVLKTGDIRVIYQFGKENSQYEAHTD
NDVLVLLDVTPDQSMLDEGVAREVVNRIQKLRKKVGVADEVTVYYDVRGSDNYLRDITEK
HGSNISSNIKSPFKQHPIPPSDIIINETMQLKGSELELTLVRGHEESTNGPMCKYLNVQI
RSNGLLTGEFCCLCCRRDFVLCGPGTDMLGT
NT seq
3336 nt
NT seq
+upstream
nt +downstream
nt
atggttgaaccagtgccagaaaagttagatttcccaaaagaggaagaaaaaattcttgca
atttggaaagaaatagatgcttttaaaacatcattgaaacaatcaaaaggaaaaccaagg
tatgcattctatgatggacctccatttgcaactggacttccccactatggtcatattttg
gcaggaaccattaaggatattgtaacacgatttgctcatcagagtggatttcatgtggat
cgtaaatttggatgggattgtcatggactgcctgtggaatatgaaattgacaaatcactt
ggcatcaaaggaccagaagatgttgcaaagattggaattgctgaatataatcgacaatgt
agatctattgtgatgcgatatgcttcacaatgggagctcatagtaaatcgtctgggtcga
tggattgattttgaaaacgattacaaaacattatatccttggtttatggagtcagtatgg
tgggtcttcaaacaactgtttgacaaaggctttgtgtacagagggtttaaagtcatgccg
ttttcaaccggctgtcacactcctctatcaaactttgaagcaaatcagaattacaaagat
gttaatgaccctgcagtgatcattagctttccattggtaaaagatccaaatgtaaagttg
attgcatggacaaccacaccatggacgttaccaagtaaccttgctttgtgtgtcaatcct
aaaatgacatatgtcaaggttgaagatcaagctacaggcagtgtttatattctcatggaa
gcgagattggttgcattgtataaaaatgaatctgaatacaaagtaattgagaaaatggtt
ggatctgctttatttggcttaaagtatattcctgtgttcaattactttgaaagtctgaag
gaaactgcttttaaagtgttaacagacacttatgtaacggacgatagtggtacgggtgtt
gttcaccaagctccctactttggcgcggacgactaccgtgtttgcttggcaaacaacgtg
tttaagaaagatggaattcccatttgtcccgtggatgcaagtggaaagtttacaagtgat
gtcacagatttccagggaatgtatgttaaggatgctgacaagcatatatgcaaacacctg
aagcagaacaatcgtttagtgcatcagagcaccactaagcataactatccattctgctgg
agatctgacacaccactcatttataaagctgttccaagctggttcatcagggtggaaaac
attacggataaattattggaaaataatgctcagtgttattgggtacctgattttataaaa
gaaaagcgctttgcaaattggttgcgagacgcccatgactgggcagtatcaaggaaccga
tactggggaacccccatcccgatatgggtgagtgaagacttggaggaaattgtttgtatc
gggtcgatcgatgaacttgctcaactcagtggggttcgtgtaactgacttgcacagagaa
agtgttgatgatatcaccataccatcacgcatgggtaaaggggttttacgtcgtattcca
gaagtatttgattgttggtttgaaagtggagcaatgccgtacgcccaacttcattatcct
tttgagaacaagaaagaatttgaggagggatttccagcagacttcatcgctgaagggatt
gaccagaccaggggttggttttacacgttgctggttctttcaactggtttatttggaaaa
cctccgttcaaaaatctaattgtgaatgggcttgtactggcaagtgatgggcaaaagatg
agcaaacgtaagaaaaactacccagacccgatggaaattatatctcagtatggtgcagat
gctcttcgcttatatcttatcaattctccagtagttcgagctgaaaaccttaggtttcag
tctaatggtgttcgtgatattttgaaagatgtcttcttgccctggtataatgcatatagg
ttccttattcaaaacattatcagattagaaaaagaagagagtgccactttttcttacaaa
gatgaagatcttggatcatccagcaacatcatggatcagtggatcctctcatccatgcaa
agtcttcttcagtttgtcaagcaggagatgcatggttacaagttgtacactgttgttcca
aaacttgtacgttttgttgagttacttaccaactggtatgtgcgatcaaatagaaaaaga
ttgaagggtgatgggggtttggaagattgccagaaagctttacagactttgttcagtgtc
atatttaccatcacccgaactatggcaccgttcacacctttccttactgaacaaatgtat
cagaacctacgtcggattattccacatttacaatcggatgattgtaggagtatccattac
ttgatgctgcctcaaccaaaggaaagtttaatcaatgtaaagatagagaaagcagtctcg
cgaatgcaaacggtgattgagcttgcaagagttattcgggatcgaaaaaccatgccaact
aagtacccccttcctgagctagtggtgatccataaagatcctgaataccttgctgatgtt
gtaagtttgcaaagttacgtaacggatgaattaaatgtccgtaatgtgacaacatcttca
gataaagtgaaatatggagtcaaactccgtgcagagccggatcatgttgctttggggaaa
aggttaaagggtgactttaagaaaatgatggcagctatacagaaacttactgatgtacag
gttgaagactttatatcttctggttcaattcaacttatgggacatgttcttaaaacagga
gatattcgagtcatatatcagtttggaaaagagaattcacagtacgaagcacacacagac
aatgatgtgttggtattgttggacgttacacctgatcagtctatgttagatgaaggtgta
gcaagagaagtggttaacaggatccaaaaacttcgtaaaaaggtaggagttgctgatgaa
gtcaccgtatattatgatgtcagaggttcagataattaccttcgtgacatcacagagaag
catggaagtaatatatcaagcaacatcaagtcaccatttaaacaacacccaatccctcct
tctgacatcataatcaatgagaccatgcagttaaaaggaagtgaattggaactcacattg
gttcgaggtcatgaggaatccactaatgggccgatgtgtaaatatttaaatgttcaaatt
aggtcaaatggacttcttacaggtgagttttgttgtttgtgttgtagaagggattttgtt
ctgtgtgggccaggtactgacatgttaggaacctga
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