Ciona intestinalis (yellow sea squirt): 113473993
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Entry
113473993 CDS
T01056
Name
(RefSeq) 4-coumarate--CoA ligase 1-like
KO
K01904
4-coumarate--CoA ligase [EC:
6.2.1.12
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00130
Ubiquinone and other terpenoid-quinone biosynthesis
cin01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
113473993
Enzymes [BR:
cin01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.12 4-coumarate---CoA ligase
113473993
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Motif
Pfam:
AMP-binding
AMP-binding_C
Spond_N
Motif
Other DBs
NCBI-GeneID:
113473993
NCBI-ProteinID:
XP_009859317
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Position
8:3354322..3361114
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AA seq
522 aa
AA seq
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MGITSDIVIGIPESDLCGFVCNLIREHGDDIALVDATTEQSFTFNQVCDLSIKFASVLNK
RGLRRQEVVAVCCSNCIEYPILVLGAAANNAISTTCNPHYTYHEMLKQFQHCQPKFVITN
ADQVEKVKQIADQVKSIQEIFTVDESTEVISIQKLLEKEDGTSFPTNVSFDVKEDVLLLP
YSSGTTGFPKGVMHTHYSFVSLMHYAMHTKPPMRLVTYTCIPLFHILGILRQFANLIKGW
KHIIDKRFNVEQLLKCVEKYKVNTMTSVPPMLVALQNYQHFDKYDTSSLKIVGSGAAPLA
LTVKNKTSKNLGVDIVQGWGLTEMLVSVHRSPNYPEGSVGQLMPNTQFKVVDPDSLKELG
INEDGECWVKGPQLMKGYYKNQSETSRCITSDGWFRTGDIGHYDENGFIFIVDRLKELIK
YKAFQVPPAELESVILSNPKVADVGVTGIPDPEAGEVPRAYVVRKDGTLTEEELNNFVQS
RVSKYKYLYGGIKFVNSIPKSPTGKILRRKLHEHAFKELNKL
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgggtataacaagtgatatagttattggtatacctgaatcggatttatgtggtttcgtg
tgtaacctaataagggaacatggagatgatattgcattggttgatgcaaccacagaacaa
agtttcactttcaaccaagtatgcgacctgtcaatcaagtttgcttctgtgttgaataag
agaggtttaagaaggcaagaagttgttgcagtttgttgttcaaactgtattgaatatccc
atactggtgcttggtgctgctgctaataatgcaatctctactacatgcaacccacattat
acttaccatgaaatgttgaagcaattccaacactgtcaaccaaagtttgttataactaat
gctgatcaagttgaaaaggttaaacaaattgctgatcaagttaaatctattcaggaaata
tttactgttgacgaaagtacagaagttatttccattcaaaaactactggagaaagaagat
gggacatcttttcctactaatgtttcattcgatgtaaaagaagatgttctattacttcca
tactcaagtgggactactggattccctaaaggcgtaatgcatacacattacagctttgtg
tctctaatgcactatgcaatgcatacaaaaccacccatgcgacttgtgacttacacctgt
attcctttgtttcacatattgggaatattgaggcaatttgcaaatttaatcaaaggatgg
aaacatattattgataaacgatttaatgttgaacagttgctgaaatgtgttgaaaaatat
aaggttaacacgatgacttcagtaccacctatgctggttgctcttcaaaactaccaacat
tttgataaatatgacacttcaagcttaaagattgttggatcaggtgctgcacctctcgct
ttaactgtgaagaacaaaacctcaaaaaacttgggcgtggatatagtacaaggttggggc
ttgacagaaatgttagtctcagttcaccgatcaccaaattatcctgaaggttcagttggc
caactcatgcccaatacacagttcaaggtagtggatccagatagtttaaaagagcttggg
ataaatgaagatggagaatgttgggtgaaaggaccacagctgatgaaaggatattataaa
aaccaaagtgaaacttctcgctgtataacttctgatggttggtttcgaactggtgatatc
ggccattacgatgaaaatggatttatttttattgttgacagacttaaagaactgattaag
tataaagcatttcaagtaccccctgccgagctagaaagcgttatcctttccaaccccaaa
gttgccgatgttggggtaacagggattcctgaccctgaagcaggggaagtccctcgtgct
tatgttgttcgaaaagatgggacgttgactgaagaggaattgaacaattttgttcaaagt
cgagtatcaaaatacaaatacttatacggtggaatcaaatttgtgaacagcattcctaag
tctccaacaggaaaaatattaagaaggaaattacatgaacatgcttttaaagaattaaat
aaactataa
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