KEGG   Ciona intestinalis (yellow sea squirt): 445802
Entry
445802            CDS       T01056                                 
Symbol
b4galt
Name
(RefSeq) beta-1,4-galactosyltransferase
  KO
K07967  beta-1,4-galactosyltransferase 2 [EC:2.4.1.22 2.4.1.90 2.4.1.38 2.4.1.-]
Organism
cin  Ciona intestinalis (yellow sea squirt)
Pathway
cin00052  Galactose metabolism
cin00510  N-Glycan biosynthesis
cin00513  Various types of N-glycan biosynthesis
cin00514  Other types of O-glycan biosynthesis
cin00515  Mannose type O-glycan biosynthesis
cin00533  Glycosaminoglycan biosynthesis - keratan sulfate
cin00601  Glycosphingolipid biosynthesis - lacto and neolacto series
cin01100  Metabolic pathways
Module
cin_M00071  Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
Brite
KEGG Orthology (KO) [BR:cin00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00052 Galactose metabolism
    445802 (b4galt)
  09107 Glycan biosynthesis and metabolism
   00510 N-Glycan biosynthesis
    445802 (b4galt)
   00513 Various types of N-glycan biosynthesis
    445802 (b4galt)
   00515 Mannose type O-glycan biosynthesis
    445802 (b4galt)
   00514 Other types of O-glycan biosynthesis
    445802 (b4galt)
   00533 Glycosaminoglycan biosynthesis - keratan sulfate
    445802 (b4galt)
   00601 Glycosphingolipid biosynthesis - lacto and neolacto series
    445802 (b4galt)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:cin01003]
    445802 (b4galt)
Enzymes [BR:cin01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.1  Hexosyltransferases
    2.4.1.22  lactose synthase
     445802 (b4galt)
    2.4.1.38  beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase
     445802 (b4galt)
    2.4.1.90  N-acetyllactosamine synthase
     445802 (b4galt)
Glycosyltransferases [BR:cin01003]
 Glycan extension
  Type 2 chain/Poly-N-acetyllactosamine
   445802 (b4galt)
SSDB
Motif
Pfam: Glyco_transf_7N Glyco_transf_7C Glyco_tranf_2_2
Other DBs
NCBI-GeneID: 445802
NCBI-ProteinID: NP_001027773
Ensembl: ENSCING00000018315
UniProt: Q9NDP2
LinkDB
Position
11:complement(3438056..3442587)
AA seq 413 aa
MSLRHQYNKGLVKRRTNYGLRAKWLTLCLILFAIELVIVYFRIHDVILVISLHLNIKLDW
IRGLETNCEAVPGHNSLKDSRALLNGGENASPLPFCPEMPPNLLGKQELGNEDEDVSLDD
LVKNYTLVEPGGRFKPAQCVPRHKVAIIVPHRNRERHLRQFLKAIHPVMQRQQADYGVFV
VHQSGTGTFNKAKLLNIGYTEALKQDDYDCFIFHDVDLLAEDDRNLYRCADVPRHLSVGI
DKWDYQLPYDALFGGVIAMTKDQFAQVNGYSNEYWGWGAEDDDMYVRILHSCLGLERAQY
DVARYRMAYHPSDKSNRVNPYRYTLLVGAAERQRHDGLNNLHYSLVEKTQLPLYTNISAD
VGKPPLNPKTVGFGTGIDIVVSISLLLLMLTMTCCTCVKSRLPHVLLCPRRIP
NT seq 1242 nt   +upstreamnt  +downstreamnt
atgtcactcaggcaccaatacaacaaaggcctggtaaaacggcgaacaaattatgggctt
agagcaaaatggttaacgctctgtctaattctttttgccatagaactggtaatcgtatac
tttcgtatacacgacgtaatactcgtcatttcgttacatctcaacatcaagttggattgg
attcgtggcctcgaaacgaactgcgaagccgtacccggtcacaattcattgaaagacagt
cgggcactgttaaatggaggcgaaaacgcgtcccctctgccattttgccccgagatgcct
ccaaatctcttaggaaaacaggagcttgggaacgaagacgaggacgttagcttggacgat
ctagtaaaaaactacacgttggttgaacctggtgggcggttcaaaccggcgcaatgtgtc
cctcgtcacaaggttgcgattatcgtcccgcaccgtaaccgtgagagacacctacggcag
tttctaaaagctatacaccctgttatgcagcggcagcaagccgactatggtgttttcgtt
gttcaccaatccggcaccggcacatttaacaaggcaaagctgttaaatatcggctacact
gaagcgctgaagcaggatgattatgattgcttcatctttcacgatgtcgacctgctcgct
gaggacgaccgcaatctgtaccgatgtgccgatgtacccagacatttatctgttggtatc
gacaaatgggattaccaactgccatatgacgcactgttcggtggagttattgcaatgacc
aaagaccaatttgcccaggtcaacgggtattcgaacgaatactggggatggggtgcagaa
gatgacgacatgtatgtgaggattctgcatagctgtcttggtttagaaagagcacaatat
gacgttgcacggtatcgaatggcctaccacccttcggacaaaagcaaccgagtaaatcca
tatcgttacaccttactcgttggcgccgccgagcgacagaggcatgatggattaaacaac
cttcattacagcttggtagaaaaaacacagctaccattatacacaaacatatccgctgat
gtaggaaaaccaccgcttaaccctaaaacagtaggtttcggtacgggtattgacatcgtt
gtgagcatatctctactcttgcttatgctaacgatgacgtgttgcacctgcgtaaaatcc
cgcttgccgcacgtcctgttgtgcccacgaagaataccataa

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