Ciona intestinalis (yellow sea squirt): 778607
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Entry
778607 CDS
T01056
Symbol
fos
Name
(RefSeq) transcription factor protein
KO
K04379
proto-oncogene protein c-fos
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
778607 (fos)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cin03000
]
778607 (fos)
04131 Membrane trafficking [BR:
cin04131
]
778607 (fos)
Transcription factors [BR:
cin03000
]
Eukaryotic type
Basic leucine zipper (bZIP)
AP-1(-like) components, Fos
778607 (fos)
Membrane trafficking [BR:
cin04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
778607 (fos)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bZIP_1
bZIP_2
bZIP_Maf
Motif
Other DBs
NCBI-GeneID:
778607
NCBI-ProteinID:
NP_001071706
Ensembl:
ENSCING00000023347
UniProt:
Q4H3J9
LinkDB
All DBs
Position
11:4133418..4144326
Genome browser
AA seq
501 aa
AA seq
DB search
MYQELSTVYGEQCPPQSAAFESDIAFAQRADQHLNQSLRAYPYGPASDLGIHQPLYGSSG
DLRQIQQPMAGIPPSYGEATHNQSHDLPTVMSRPDLQWLVTTSNVGMRTRTPPNTVSSPH
VGRTDESSAITISHHDLPHHRFQQGEQLPPPLQRTNTGNKRVKMEANSAVPPRPKGTPGR
KRKFQDHELSPAEATKRHIRRERNKIAAAKCRNRRRELTDRLQGETDHLEDHQSILHQEI
MSLQQEKEHLEFLLAAHSPQCKAGIGASEHLLLAHDDRMMQSNMVGGMHEMSLVPPPEVM
EEMMPQPHTDSCVPDNTHTHPGYYTEYSNQDTTLPVSLPSTCAPNSTGPTDLSLHSQSYG
TPPTRFPNMNLEPLAISEAPLNTPVCTLTTPSISSGVFTFPSSTSGGLNTTTATTDMSYN
YQTSSVSTPCPDFFQTPRLPTTPSYTASVTSFPADGQSFPVLSSHLQQQPAQSCSAAHRR
SSSSESHNSPDSVKSPKLLSL
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgtatcaagaactaagcaccgtgtatggcgagcaatgcccaccacaaagtgcagcattc
gaatctgacatcgcgttcgcccagcgcgctgatcaacatctaaaccaatcacttcgagca
tacccatacggaccagcgagtgacttaggcattcatcaacctctgtacggaagttcagga
gacctgcgacaaatccaacaaccgatggccggcattccaccaagttacggagaagcaaca
cacaatcaaagtcatgacctccctacagtaatgagccgacccgacctccaatggttggtt
accacaagcaacgttggaatgaggacccgaactcctccgaacacagtttcttctccccac
gtcgggaggacagatgagagctccgcaatcaccattagccaccatgatcttccacatcac
cggtttcaacaaggggagcagcttccacctcctctgcaaagaacaaacactggaaacaag
agagtgaagatggaagcaaactcggctgttcctccccgaccgaaaggaacgccaggaaga
aaacgaaagttccaagaccatgagttaagcccagctgaagcaacaaaacgtcacattcga
agagaaagaaacaaaatcgcggcagcaaaatgcagaaaccgacgacgagagctcacagat
cgactccagggcgaaacagatcacttggaggatcatcagagtatcctccatcaagagatc
atgtccctacagcaggagaaggagcaccttgagttcctccttgccgcgcattctcctcag
tgcaaagcagggatcggagccagtgagcatcttcttcttgctcatgatgatcggatgatg
cagagcaacatggttggaggaatgcacgagatgtcgctcgtcccacctccggaagtgatg
gaggagatgatgccacaacctcacaccgattcatgcgtaccagacaacacacacacccac
cctgggtattacactgagtattccaaccaagacactacccttcccgtatctcttccatct
acctgcgcacccaacagcacagggccgactgacttgtctctccactcacaatcctacgga
accccgccaaccaggttccctaacatgaacctcgaaccattggcaatatctgaagcccca
ctcaacaccccagtatgcacgctcacaactccctcgatcagcagcggcgtcttcaccttc
ccaagcagcacctccggaggacttaacaccaccacagccactacggacatgtcatacaat
taccaaacctcttcagtcagcactccgtgcccagattttttccagactcctcgactcccg
acgaccccgtcttacacagcctcagtgacgtcgtttccggctgatggccaatcattcccg
gtattgagcagccaccttcaacagcagccagcacagtcgtgctcggcagcgcacagaagg
agctcatcaagcgaaagccacaacagcccagattcagtgaaatcgccgaagttgctttcc
ctataa
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