Ciona intestinalis (yellow sea squirt): 778622
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Entry
778622 CDS
T01056
Name
(RefSeq) Fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00514
Other types of O-glycan biosynthesis
cin04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
778622
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
778622
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cin01003
]
778622
Enzymes [BR:
cin01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
778622
Glycosyltransferases [BR:
cin01003
]
Glycan extension
O-Glycan
778622
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fringe
DUF846
Motif
Other DBs
NCBI-GeneID:
778622
NCBI-ProteinID:
NP_001071719
Ensembl:
ENSCING00000009226
UniProt:
A0ACM8Q852
Q4H3H4
LinkDB
All DBs
Position
Unknown
AA seq
381 aa
AA seq
DB search
MLFYGTTSATTDYIICYYFCRAKQVSKKMKRNCISTIQTLLFWLFALLCLTLWVIYVISD
MIQLRYKETERQRQPRINRKISAYYYGTDHYYEEYIDRNLKNQVVENKHENQTNLDDIFI
SVKTSGKFHKTRLNVIIDTWFRDANQQTYFFTDTDDDGLSKKTDGHMVNTMCNSSHIRRD
LSCKLGAEYDFYIKSNKRWWCHFDDDNYVNVDQLVMLLRDYDHNMDFYIGKPSLNYPFTT
TFKGEKVGFWFATGGAGVCISKALAQRMKPWCSNGGLYRTSEHLNAPDDCTLGFVVSNRL
AVELTSSNLLHSHLETLGQLNPATLTEQVTLSYGLDNRNNIIQLQESSHNLPISKDPTRF
RSLHCKRKPDTCSRVHRTKSG
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgctattttatggtacaacaagcgcaacaactgattatattatttgctattatttttgc
agggctaaacaggttagcaaaaaaatgaagagaaattgtatttctacaatccaaacacta
ctgttttggctgttcgctttgttatgtcttacactttgggtcatttatgttatttctgat
atgatacagctaaggtataaagagacggaaagacaacggcagccgaggataaacagaaaa
atctcggcttattattacggaaccgaccactattacgaagaatatatcgaccgaaatttg
aaaaatcaagttgtggaaaacaaacatgaaaaccaaacaaatttagatgacatttttatc
tccgttaaaacgagtggaaaatttcacaaaacaagacttaatgttattattgatacctgg
tttcgggatgcaaatcaacagacctacttttttacggatacagacgacgacggtttatcc
aagaaaactgatggacatatggtcaatacgatgtgcaattcaagtcacatacgacgagac
ctaagttgcaaattaggagcagaatacgatttctacataaagtcgaacaaaagatggtgg
tgccatttcgacgatgacaattatgttaacgttgatcaacttgtgatgttactgcgtgat
tacgaccacaacatggacttttatattggaaaaccaagcctaaactatccgtttacaaca
acattcaaaggagagaaagttggcttttggtttgctacgggtggagctggtgtttgtatt
tctaaagctctagctcagaggatgaagccatggtgcagcaatggtgggctataccgaacg
tccgagcatctaaacgctcctgacgactgtacactgggattcgttgtgtctaaccgacta
gcagtcgaactaacgtcatccaatctactgcattctcatctggaaacactaggccaatta
aacccggcaacactgactgagcaggtgacattgagctacggcctcgacaatcgtaacaac
atcatacagctgcaagaatcaagccataatctacctataagtaaagacccgacaaggttt
cgatccttgcactgtaaacgaaagccagacacatgctccagggtacatcgtacgaaatcc
ggatag
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integrated database retrieval system
