Ciona intestinalis (yellow sea squirt): 778624
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Entry
778624 CDS
T01056
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase lunatic fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00514
Other types of O-glycan biosynthesis
cin04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
778624
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
778624
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cin01003
]
778624
Enzymes [BR:
cin01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
778624
Glycosyltransferases [BR:
cin01003
]
Glycan extension
O-Glycan
778624
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fringe
Motif
Other DBs
NCBI-GeneID:
778624
NCBI-ProteinID:
XP_018670409
UniProt:
L7N0V1
LinkDB
All DBs
Position
14:1673003..1674730
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AA seq
320 aa
AA seq
DB search
MFRKFKLVLLGVLCICTLLYLSKKLIYPSSSDVTYIPIGKGGTFGDVKVFVNPVDDGKVT
LEDIFISVRTSRKFHESRIDPIVKTWFNLAREQTYIFTDGDDDKLNETTGGHVINTHCGR
DYNRSHLSCKTGTVYDTYLASGKKWWCRFDDDNYVNPRRVVHLVNGYNWTQDICIGKLSV
PFFTTDYHGHSEIYQFAHGGAGCCISRPLALKMKPWCGREELVVTTREAGMQEDCALGFI
ITNRLKINLTLTDLLHSTRESLEDLNPDTLHEQASIGQSPGNTVNLDKVKNVKIFNHDVD
PTRFITLHCFLFPTANICKI
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgaaagttcaagttagtcttgttaggagtgctatgtatatgcacgctgctctat
ctttccaaaaaattaatataccctagcagcagtgacgttacatatatacctattggtaaa
ggaggaacttttggggatgtaaaagtttttgtcaacccagtggacgatggtaaagtaact
ttagaggatattttcatcagcgtaagaacaagcagaaaatttcacgaatcccgaattgac
ccaatcgttaagacttggttcaatctggcgagggagcagacgtacattttcacagacggt
gatgacgacaagctaaacgaaacaactggaggtcatgttataaacacacactgtggacga
gattacaatagatcacatttaagctgtaaaactggaactgtgtacgatacatatttagct
agtggtaaaaagtggtggtgccgatttgacgacgataattacgtcaatccacgacgggtg
gtccatcttgtgaatggttataattggacacaagacatttgcattggtaaactaagcgtt
ccattttttacaacagactatcatggtcactctgagatatatcagtttgcccatggcggt
gctggctgttgtatttcccgaccattggccttgaaaatgaaaccgtggtgtggaagagaa
gaactggttgtgactacaagggaagcgggcatgcaagaagattgcgctttgggtttcatt
ataaccaaccgtttgaaaataaacttgacactaacagaccttttgcattctacaagagag
tcactcgaagatttaaacccagacactctacatgagcaagcaagcataggacaaagcccg
ggtaacacagtgaatttggacaaagtgaagaatgtaaagatatttaaccatgatgtagac
ccaacacgttttattactcttcattgttttctctttcctactgctaatatatgcaaaata
tag
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integrated database retrieval system
