KEGG   Ciona intestinalis (yellow sea squirt): 778626
Entry
778626            CDS       T01056                                 
Name
(RefSeq) Fringe precursor
  KO
K05948  fringe [EC:2.4.1.222]
Organism
cin  Ciona intestinalis (yellow sea squirt)
Pathway
cin00514  Other types of O-glycan biosynthesis
cin04330  Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:cin00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00514 Other types of O-glycan biosynthesis
    778626
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    778626
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:cin01003]
    778626
Enzymes [BR:cin01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.1  Hexosyltransferases
    2.4.1.222  O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
     778626
Glycosyltransferases [BR:cin01003]
 Glycan extension
  O-Glycan
   778626
SSDB
Motif
Pfam: Fringe
Other DBs
NCBI-GeneID: 778626
NCBI-ProteinID: NP_001071720
Ensembl: ENSCING00000016795
UniProt: Q4H3H0
LinkDB
Position
Unknown
AA seq 318 aa
MLRRYVMVLFGMSCVTVVLIHHSANLNCPVPTRKRISTNCTEVIYRDVQVSNSDGPSTLD
DIYITVRTSRKFHESRVAPIVQTWFNLARKQTYIFTDGDDDKLNETTGGHIINTHCGQEY
NRPHLSCKTGTVFDKYLASGKKWWCRFDDDNYVNPPRLVNLVNGYNWTQDICIGKLSVPS
YTANYRGRPEIYQFAHGGAGCCISRPLALKMQPWCGREKLVETTEDVGRHEDCTLGFIIT
NRLKIDLTLTDLLHSTRESLRDLNPGTLHEQVSIGQGPGNTVNLDQAKNAKIFSHDVDPT
RFITLHCFLYPTSSICKA
NT seq 957 nt   +upstreamnt  +downstreamnt
atgttacgacgttacgtgatggttttgttcgggatgtcgtgtgtaaccgttgtcctcatc
catcattccgcaaatttaaactgccctgtccctactcgcaagagaatatcaactaactgt
acagaagtgatttaccgcgacgtacaagtgtctaatagtgatggtccatcaactctggat
gatatttacatcaccgtaaggacaagtagaaaatttcacgaatcccgagttgctccaatc
gttcagacttggttcaatcttgcgagaaaacaaacttatattttcacagacggtgatgac
gataagctgaatgaaacaactgggggtcatattatcaacacacactgtggacaagagtat
aatcgacctcatctaagctgtaaaacaggaacagtgtttgataagtatttggcgagcggt
aaaaagtggtggtgccgattcgacgacgataattacgtcaatccaccacgtctggtcaat
cttgttaatggttataactggacacaagacatctgcattggtaaactaagcgttccatca
tatacagcaaactatcgtggtcgtcctgagatatatcagtttgcccacggcggtgctggt
tgttgtatttccagaccattggccttaaaaatgcaaccgtggtgtggaagagaaaaactg
gtggagactacagaagatgttgggaggcacgaggattgtactttaggtttcattataacc
aaccgattgaaaatagatttgacactcacagaccttttgcattccacaagagagtcactt
agagatttaaacccgggcactttacatgagcaagtgagcataggacaaggcccgggcaac
acagtgaatttggaccaagcgaagaatgcaaagatattcagtcatgatgtggacccaaca
cggtttattactcttcattgttttctatatcctacatctagtatttgcaaagcataa

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