Ciona intestinalis (yellow sea squirt): 778662
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Entry
778662 CDS
T01056
Name
(RefSeq) transcription factor protein
KO
K23727
sphingoid base N-palmitoyltransferase [EC:
2.3.1.291
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00600
Sphingolipid metabolism
cin01100
Metabolic pathways
Module
cin_M00094
Ceramide biosynthesis
cin_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
778662
Enzymes [BR:
cin01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.291 sphingoid base N-palmitoyltransferase
778662
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Gene cluster
GFIT
Motif
Pfam:
TRAM_LAG1_CLN8
Homeodomain
Homez
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
778662
NCBI-ProteinID:
NP_001071752
UniProt:
Q4H397
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Position
3:complement(5638457..5639045)
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AA seq
344 aa
AA seq
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MDLFSRGYNWFWNERFWLPENYTFKDIENHNSETNMPIRMRVHFPLAVVVMLFLRFLHYR
IVGFLCKINGVVDNRPTVKNVPELHACYRFTKRPSESQIDALTKRVDMSQRQIYVWFQNR
RSLDKPELLQKIKEGSWRCLFYAFISCFGIWTLWSAPWLWDVSYCWKDFPLQTMQTSVVM
YYLFELSFYTCLLITALHDVRRLDFKEQVIHHLATVALLSLSYVNNSMRIGSLVMISHDV
ADVFLEGCKCFNYLKRRVLADIGFICFVVAFCATRLCIFPFHVIRAASFSIPFARMCPSH
ILSVAFLLLLQILHLFWAQTIFAIVKKVLMGEHAEDSRSDVEGE
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atggatttgttcagtcgtggttataattggttttggaacgaacgtttctggctgccagaa
aactacacgttcaaagatattgaaaaccataacagcgaaacgaatatgccaatccgaatg
cgtgtacatttcccactcgctgtagttgtgatgctatttctgcgttttctccattaccga
attgtgggtttcctatgcaagataaatggcgtcgttgataaccgaccgactgtaaaaaat
gtgccagagctgcatgcttgttacagatttactaagcggccatcggaaagccagattgat
gcacttacaaagcgggttgatatgtcgcagagacaaatctacgtttggtttcaaaatcgt
cgcagtttggataaaccagagttgctacagaaaatcaaggagggcagttggcggtgcctt
ttttatgcctttatttcctgctttggtatttggactttatggtctgcgccttggctatgg
gatgtatcttactgctggaaggattttccactacagacgatgcagacctctgtagttatg
tattacttgtttgagctcagtttttacacttgtctgctaataactgcactgcacgatgtc
cgtaggttagatttcaaagaacaagttatacatcatcttgctaccgttgctttgttgtct
ctgtcttatgtaaacaacagcatgcgaataggttctttggttatgattagtcacgacgta
gcagacgtgtttcttgaaggttgcaagtgctttaattaccttaagcgtcgagttctggca
gacattggctttatttgtttcgttgtagcgttttgcgcaacgagactgtgcattttccct
tttcacgttataagagcggcttcgtttagtatccctttcgccagaatgtgcccgtctcat
attttatcggtagcatttcttctgctgctgcagattcttcatttattttgggcacaaact
atatttgccatcgtgaaaaaagtccttatgggagaacatgccgaagactccagaagtgac
gttgaaggtgaataa
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