Ciona intestinalis (yellow sea squirt): 778729
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Entry
778729 CDS
T01056
Name
(RefSeq) uncharacterized protein LOC778729
KO
K09442
SAM pointed domain-containing ETS transcription factor
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cin03000
]
778729
Transcription factors [BR:
cin03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Ets-type
778729
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GFIT
Motif
Pfam:
Ets
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
778729
NCBI-ProteinID:
XP_002122285
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Position
12:complement(3099624..3103623)
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AA seq
582 aa
AA seq
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MSFAANTSFTSYITGGKLNFGSIGISGERPNFPSPRVALPDIGKIMREERSCLTVPHGED
APLHSENRTVEKAPRVSPTSEICSVNITANPSSGQAGAGLLSNTLNRAETFSEEPTHFAS
IDAAKIDGHLTTCHSAFLQSPCATFSEMLRDDVTYGFCYKADSDFYSFGAEENTPALENS
SNKNEAVVPDDAPNTELHILQKSKFNNTNLTSSLVRPTSFSADTNEPSTLQGTTATEFNN
NDQVLDKDTTQTAIPYHNLSPSMDFSPSEANFYAAPQAYNNLPSSIATPNSEKMAEAPEM
SSSILDDLDLSDINNSSMEKMEREYFNEAIKEVYFACSLLNLPPDPILWSKQHVEKWVMW
TTHQCRLPALDVSVFRMPGTALCRMTERDMHKLAPSCGDILHARLEIWRSAVGSQLLQSN
EYQEIEENMGVPPPAAETGLFSLKPKHLNCQSNYSTEVITDNKMMISTAIHTRSKLEDTN
SSAAALTPNYSSGIHLWQFLKELLLQPQSFSRYIRWIDKQRGIFKIEDSVEVARLWGVRK
NRPAMNYDKLSRSIRQYYKKGIIRKTKVSQRLVYQFVEPTHE
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgtcctttgctgcgaacacttcgttcacatcatatataaccggaggaaaactgaacttt
gggagcattggaatttcaggggaaagaccgaatttcccaagtccacgagtggcattgcca
gatattggtaaaataatgcgggaagaacgatcatgccttactgtgccacatggagaagat
gccccactgcattcggaaaatagaacggttgaaaaagcgccacgcgtctccccgaccagt
gaaatttgttcagtaaacattactgccaatcctagttccggacaggcgggggctggtctc
ttaagcaacactttaaatagagccgagacctttagcgaagaaccgacacatttcgcatca
atagacgctgcgaaaatagatggacatcttacgacttgccattcagcgttcttacaatca
ccgtgcgcgactttcagcgaaatgctgcgagacgacgtgacctatggcttctgctataaa
gcagatagcgatttctacagctttggggccgaggaaaatacaccagcactcgaaaattct
agcaataaaaacgaagcagtcgtgccagacgatgcaccgaacacggaacttcatatttta
caaaaaagtaaattcaacaatacaaatttgacgtcttcgttagtaaggcctacatcgttt
tcagctgacacaaatgaaccttcaacccttcaaggtacaacagccaccgaattcaacaat
aatgatcaggtactggacaaggataccacccaaactgcaatcccatatcacaacttatct
cctagcatggatttttcgccaagtgaggcgaatttttatgcagcaccacaagcgtataat
aatttaccaagcagtattgcaacacccaacagcgaaaaaatggcagaagccccagaaatg
tcaagtagcatactcgacgatttggacctgtcggatattaataacagtagcatggaaaaa
atggagagggaatattttaacgaggcaataaaggaagtctatttcgcttgttcactgctc
aatttgccaccggatccgattctgtggtcgaagcagcacgttgagaaatgggtcatgtgg
acgacacaccagtgtagactgccagctcttgacgtgagtgtgtttagaatgcctggcact
gctctatgtcgaatgacggaaagagatatgcacaagttagcaccaagctgtggtgacatc
ttacacgctaggcttgagatttggagatcagctgttgggagtcagcttttacaaagtaat
gaataccaagagattgaagaaaacatgggcgtcccacctccagctgcagagacaggatta
ttttcgctcaaaccaaaacacttaaactgccaatcaaactactcaactgaagtcattact
gataataaaatgatgatatcaactgcaatacataccagaagcaagctagaagacacaaat
tcaagtgctgcggcgctaacaccaaactattcgagtggaatccatttgtggcagtttctg
aaagaactgctccttcaaccgcaatcattcagtcgttatataagatggatagacaagcaa
agaggcatcttcaagatagaagactccgttgaggtagcgaggctttggggcgtccggaaa
aatcgaccggcaatgaattatgacaaactaagtcgttctataaggcagtattataaaaaa
ggaatcatacgaaaaactaaagtttctcaacggctcgtttaccagtttgtggagcccact
cacgagtaa
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