Ciona intestinalis (yellow sea squirt): 778919 Help Entry 778919            CDS       T01056                                  Symbol gli Name (RefSeq) transcription factor protein   KO K16798   zinc finger protein GLI2 Organism cin  Ciona intestinalis (yellow sea squirt) Brite KEGG Orthology (KO) [BR:cin00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:cin03000]     778919 (gli) Transcription factors [BR:cin03000]  Eukaryotic type   Zinc finger    Cys2His2 GLI-like     778919 (gli) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  zf-C2H2_15 zf-H2C2_2 zf-C2H2 FOXP-CC Zap1_zf1 zf-C2H2_4 zf-C2H2_aberr zf-C2H2_8 Zf-C2H2_ZNF451_C Motif Other DBs NCBI-GeneID:  778919 NCBI-ProteinID:  NP_001071951 Ensembl:  ENSCING00000009941 UniProt:  Q4H3F1 LinkDB All DBs Position 7:complement(1248529..1269628) Genome browser AA seq 1557 aa AA seqDB search MENAAKSDVQVLCHKSGQNPALVEKNEAQTHLTPDSDIQQLELSSPAADAPKPGKQPVLS RKQNRVVDREEEAVVSSSTSPSDKRYKRSESPPESELPRHRNEVLHHQLRHQSTLEAPTS TTSFEDEEKRSNSGKGGRGSSNIVSKPQGCTTSTGKMKEEITSNQRTATDKHQFTKPSPS NRNMTSSNLGNTCNGDDRRYPINSHLPVDSQLRDGRYPFDPRHMHTAPGVSGSPIHSDVS LIPMSPQQNTNPFNYNSSLEFYMGGLSQGGLRSPTMSMLSQARNLSPHHSIQELEKLCYP YYSPHQSNMAVNSAQQGSNQGLAGNFSQNINQLAYYQLMQQQQRLLAVAARNDRNLALSL EKQEELGRFPSPLCRSRARKRPLSISPCFSDTGLDITAMIRTSPNSLLPFGGIANSRSSS VASGGSYGHLAAGGISPTFGYQTPMMTSPQHLHAHLLSRQMQSSFASQLLPGFPPNQISL DKSASRFDPNISGRNFHPHVGASAASKEMCNSHLDNKNFNKHQIETQSPNVQFNNNSNNN NNSGVSPGAHAGNDENDVVYDTNCFWENCSLEFDTQEQLVHHINNDHIHGDKKEFVCRWR GCARDQRPFKAQYMLVVHMRRHTGEKPHRCTFDGCTKAYSRLENLKTHLRSHTGEKPYVC EYPSCTKAFSNASDRAKHQNRTHSNDKPYACKQAGCTKRYTDPSSLRKHVKTVHGPAAHV TKRMKAEQERNGKRTGQNIKQEPGLDKEKQKDDGSGTKTSCHPLSPGSNPPSNDQNPPSN MNPRSNQSSCTSGSDVSVTPQNSPHMTSQNNDSGVDVNVGGNEGDSDGDIVVDENPQPDS TSGGVGVQSRHRGTVRASMVPRLVNKKMQNLSLGGLSPNVESYVDIGGYDDQRKLGMNKS ESFTEVSSTTAFPAKQKSTTYPRKLPLTPHRQVALLNQDRRDSGTVSDGSRKSSMASQNS RRSSQNTGFNVAGSYDPISLDSSRRSSANCGSGSSTINAFHLHRLRSRFNEDAGLPPPTP LDREGYTKSQLSRWFKDEQPTVDPAGYQFNPQARPSLPQMGPPKPPEVRRRSEGAQSRPS RTPLPQHLGGNAFRRASDPIRNSPQVDPNRLPSVQRYNSWNNVNPLPSIKPQRSNNTSTS QYNVPNQQHVHLQRQRSESNGSYYNSESGYRSNGSNMAIHQPNYQVNEQVMMENFNNDVM SHDVTFNGPMYGGNQHMQIPNMAHPQQMMTSPGSVGAMTSSHQRYTPQRQNFPQNPNFHG FSNQDRGSNRNAPNNIQQNQYYSNPQMNSNPQTAQQMHNPHGPDMRHGEMMQRNIPQQFM NPEFMNMAYNNNHAPSPYATQRQATQNQGRSPHVINSGNMTVQNNHTQQGHSSNQITPRP PVSSTSSNQNRIRLQRIRQHSGAGSVTSYNQPTRPVTSESGGQGRINYTPDAQIPDEFLQ QEFIDRIPVLQPNSNRGGEPNDNQPYVKMAADSTTGPDMEQLNGFHDNDDAMSGTNTDVT LPPMSAFSSRMATPIMGKYPPQIPTNQHPASNMAINSMSSMLSTLEEENKYLSLIPQ NT seq 4674 nt NT seq  +upstreamnt  +downstreamnt atggagaacgcggcaaaaagcgacgttcaagttctgtgtcataaaagtggccaaaacccg gctttagtggagaagaatgaagcccaaactcatttgactccggatagcgacatccagcag ctggagctctcttcgccggctgccgatgcaccaaagcccgggaagcaaccagttttgagt cgaaagcaaaatcgggttgtcgatagagaggaagaagcggtagtgtcatcgtcgactagt ccaagcgacaaacgttacaaaagatcagaatcgcctcctgagtctgaactaccacggcat cgaaacgaagtattacatcatcagttacgtcatcagtcgaccctggaagcaccaacaagc acaacgtctttcgaagatgaagaaaagcggagcaactcggggaaagggggacgcggatcg tcgaacattgtctcgaaaccacaagggtgtaccacctctacaggaaaaatgaaagaagag atcacttcaaaccaacgaacagccacggacaaacaccagtttacgaaaccgtcacctagc aacagaaacatgacatcatcaaatttagggaacacttgcaatggagacgatcgacgctac cccatcaactcgcatttgccagtcgattcgcaacttagagacgggagatatcccttcgat cctcggcacatgcacactgctcctggtgtcagcggaagtccaattcactcagatgtgtct ctgattccaatgtcccctcagcagaacacaaacccgtttaactataattcatcacttgag ttctacatgggtggattatcccaaggtggcctcagatcgccaacaatgtccatgttatcg caagcaaggaacctcagtccccaccattcaattcaagagcttgaaaagttgtgctaccct tactactcaccccatcaaagtaacatggcggtgaacagtgcacaacagggttcaaatcaa ggcttagcggggaatttttcgcaaaacataaaccagctggcatactaccaattgatgcag cagcaacagcgacttcttgcggtggcagctcggaatgataggaacctcgcgctgtcgcta gagaagcaggaagaacttggccgatttccgagtccactgtgcaggtctcgcgctcggaaa cgtcctctctccatctctccctgcttctctgacactggtcttgacatcacagcaatgatc cggacttcccctaattcgctacttcctttcggaggtattgcaaactcccgtagttcatcg gtggcaagcggtggcagctatggacatctagcggcaggtggaatcagcccaacgttcggc taccaaactcctatgatgacgtcaccacagcacttacatgctcatttactatcacgtcaa atgcaatcttccttcgctagtcaactcctccctggttttccccctaaccagatctcctta gataaatcggcttcaagattcgatccgaatatttccggcagaaatttccacccgcacgtt ggcgctagtgctgcgtctaaagagatgtgtaactcccatcttgacaataagaatttcaat aaacatcaaatagagacgcagagcccgaacgttcaattcaacaacaacagcaacaataat aataactcaggtgtttctcctggcgcacatgctggcaacgacgaaaacgacgtagtgtac gacaccaattgcttttgggaaaactgttcgcttgagtttgatacccaggaacagctagtt caccatattaacaacgatcatatacatggcgacaaaaaggagttcgtatgccggtggaga ggttgtgcccgagaccaaagacctttcaaagcacaatatatgttagttgtgcatatgaga agacacacgggcgaaaagccgcaccgttgcacgttcgacggatgcaccaaagcatattca aggttggaaaaccttaagacccatctacgttcccacactggtgagaaaccttacgtgtgt gagtacccgtcctgtaccaaggcattcagtaacgcatccgacagagccaagcatcaaaat cgaacccattcaaacgacaagccatacgcatgcaaacaagcgggttgcacgaagcgttac actgatcctagctcacttcgtaaacacgtcaagaccgttcatgggcctgcagcacacgtg actaaacgcatgaaagcggaacaagaaaggaatggcaagagaacaggacaaaatataaag caggaaccagggttggataaggagaagcaaaaagacgacggatcggggacgaaaacaagt tgccaccctctgtcacccggctcaaacccgccatctaacgaccaaaatccccctagcaac atgaaccccagaagcaaccaatcatcgtgcacttccggttctgacgtatctgtgacgcca caaaattccccgcatatgacgtcacaaaacaatgactcgggagttgacgtcaatgtgggc gggaatgaaggtgacagcgatggtgatatagtggtcgatgaaaatccacaaccggattca acgtctgggggtgtcggtgtacaaagcaggcaccgtgggacggtacgagcctctatggtg ccacgcctggtcaacaagaagatgcagaatctgtcacttgggggattaagcccaaacgtc gagtcctacgttgacattggtggctatgacgatcaacgaaaactcggaatgaacaaatcc gaaagttttaccgaagtttcctcaaccactgccttccctgccaagcaaaagagcaccacc tacccgaggaagcttcctctaactccccatcggcaggtggcgttgttaaatcaagataga agggatagtggtaccgttagcgatggaagcagaaaatcgtcgatggcttcacaaaacagt cgccgttctagtcagaacactgggtttaacgttgctggttcttacgacccaatctcactt gattcttcgagacgatcaagcgcaaactgtggttcaggttcgtccacgatcaatgcattc catctccaccgtttaaggtcaagatttaacgaagacgctggtctccccccacccacccct ctggacagagaaggttatacaaaaagccaacttagtcgttggttcaaagacgagcaacca accgtggaccccgctggttaccagttcaacccccaagcccgaccgtccctgccacaaatg ggacccccgaaacccccagaagttcgacggcgcagtgaaggtgcgcaatcaaggccttca cgcactccactgccacagcacctgggaggcaacgctttccgaagagcaagcgacccaatt cgtaattcaccgcaggttgacccgaatagactaccgagtgtacagcgttacaacagctgg aacaacgtgaacccactgcctagtatcaaaccacagagaagcaacaacacgagtacttcg cagtacaacgtacccaaccaacaacatgtacatctgcaaagacaacggtcggaaagcaat ggcagctactataatagtgagagtggttatcgcagcaacggtagcaacatggccatacac cagcccaactatcaggtcaacgagcaagtgatgatggaaaatttcaacaatgacgtcatg agtcatgacgtcacttttaacggtcctatgtacggaggtaaccagcacatgcagattcct aacatggcacatcctcaacaaatgatgacgtcaccagggtctgtgggtgcgatgacgtca tcacaccaacgatacaccccacagagacagaacttcccgcaaaaccccaatttccacggg ttttctaaccaggatagaggctcgaacaggaacgcaccgaacaatatacagcagaaccaa tattactccaacccgcagatgaatagtaatccacaaactgcccaacaaatgcacaatccc cacggccctgacatgaggcatggggaaatgatgcaacgtaacataccgcagcagtttatg aacccggagttcatgaatatggcttacaacaacaaccacgcaccgtccccttacgcaacg cagcgtcaagccacgcaaaaccaaggacgatctccccacgttataaactctggaaatatg acagtccagaacaatcacacccaacagggacattcgtccaatcaaatcacgccacgcccc ccagtcagctccacgtcatccaatcagaatcgaattcgtctgcagcggatacgtcagcac agcggtgcgggtagtgtgacgtcatacaaccaacctacgaggcctgtgacgtcagaaagt ggtggacaaggacgtattaactatacacctgatgcacagattccggatgagttcttacaa caagaattcattgacaggatcccagtcctccaacctaacagcaacagaggaggagaacca aacgataaccaaccgtacgttaagatggcagctgacagcacgacggggccggatatggaa caactcaacggtttccatgacaacgatgacgcaatgagtgggacgaacactgacgtcaca ctcccaccgatgtcagcgttttcgtcgcgaatggccacgcctatcatgggtaagtacccg ccgcaaattccgaccaatcagcacccagcatcaaacatggcaataaacagcatgagttcg atgctttcaacgcttgaggaagagaacaaataccttagtcttattccccagtga

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