Clostridium intestinale: HZF06_05080
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Entry
HZF06_05080 CDS
T08934
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
cint
Clostridium intestinale
Pathway
cint03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cint00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HZF06_05080 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cint03400
]
HZF06_05080 (nth)
Enzymes [BR:
cint01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
HZF06_05080 (nth)
DNA repair and recombination proteins [BR:
cint03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HZF06_05080 (nth)
Prokaryotic type
HZF06_05080 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Ogg-HhH
HHH
EndIII_4Fe-2S
DUF3349
RnlA-toxin_DBD
Motif
Other DBs
NCBI-ProteinID:
QLY80966
UniProt:
A0A7D6VS77
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All DBs
Position
1084709..1085350
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AA seq
213 aa
AA seq
DB search
MKKKTREILEKLKTEYPDASCELNHKSPFQLLVATILSAQTTDKKVNEVTESLFEEYPDL
DSFLNLAQEEIEERIKKIGLYRNKAKNIYIMCRQLKETFNGEVPKTMEQIVSLAGAGRKT
ANVVLSNAFGVPAIAVDTHVFRVSNRIGLAKAKDVQETEDQLMKELPKKEWSLAHHLLIF
HGRRCCYARKPNCSECVINDKCNYYKENKKVVL
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagaaaacaagagaaatattagagaaattaaaaactgaatatccagatgcttca
tgtgaattaaatcataagtcaccatttcaacttttagtagcaactattttatcagctcaa
accacggataaaaaagtgaatgaagtaacagagagtctatttgaagagtatccggactta
gatagttttctaaatttagctcaggaagaaatagaagaaagaataaaaaagataggtttg
tatagaaataaagctaaaaatatatacataatgtgtaggcagttaaaagaaacctttaat
ggagaagtacctaaaactatggagcaaatagtttctttagctggtgcagggagaaagact
gcaaatgtagttttgtcgaatgcttttggtgtgcccgctatagccgtagacacacatgtg
tttagggtatcaaatagaataggcttagctaaagcaaaagatgttcaagaaactgaagat
cagttaatgaaggagttacctaaaaaagaatggagtttagcacaccaccttttgatattt
catggaagacgttgttgttatgctagaaagcctaattgttctgagtgtgttattaatgat
aaatgtaattattataaagaaaataaaaaggttgtgttatag
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