Citrobacter sp. TBCP-5362: FD428_16585
Help
Entry
FD428_16585 CDS
T10692
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
ciq Citrobacter sp. TBCP-5362
Pathway
ciq01501
beta-Lactam resistance
ciq01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
ciq00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
FD428_16585
01503 Cationic antimicrobial peptide (CAMP) resistance
FD428_16585
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ciq02000
]
FD428_16585
01504 Antimicrobial resistance genes [BR:
ciq01504
]
FD428_16585
Transporters [BR:
ciq02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
FD428_16585
Antimicrobial resistance genes [BR:
ciq01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
FD428_16585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Patched
Motif
Other DBs
NCBI-ProteinID:
QCQ72540
LinkDB
All DBs
Position
complement(3476834..3479941)
Genome browser
AA seq
1035 aa
AA seq
DB search
MFSRFFVRRPVFAWVIAILIMLAGILAIKTLPVAQYPDVAPPSVKISATYTGASAETLEN
SVTQVIEQQLTGLDNLLYFTSTSSSDGSVSIDVTFEQGTDPDTAQVQVQNKVQQAESRLP
SEVQQSGVTVVKSQSNFLLIAAVYDKSDRASSSDIADWLVSNVQDPLARVEGVGSLQVFG
AEYAMRIWLDPAKLASYSLMPSDVQSAIEAQNVQVSAGKIGALPSPDTQQLTATVRAQSR
LQTVEQFKKIIIKSQSDGAVVRIQDVARVEMGSEDYTAIAKLNGHPAAGVAVMLAPGANA
LDTATLVKDKVAEFKRDMPQGYDVAYPKDSTEFIKISVEDVVQTLFEAIILVVCVMYLFL
QNLRATLIPALAVPVVLLGTFGVLALFGYSINTLTLFAMVLAIGLLVDDAIVVVENVERI
MRDEGLPAREATEKSMGEIAGALVAIALVLSAVFLPMAFFGGSTGVIYRQFSVTIISAML
LSVVVALTLTPALCGSILSHTAPHKKGFFGIFNRFYSRTEQGYQRGVLHVLRRSVSVMGV
YALLCGAMALAMWKLPGSFLPTEDQGEIMVQYTLPAGATASRTAEVNRQVTDWFLNKEKA
NTDVIFTVDGFSFSGSGQNAGMAFVSLKNWSERKGEENTAQAIALRASKELGAIRDATLF
AMTPPSVEGLGQSNGFSFELMANGATDRDTLLQMRNQLIAQANQSDILHAVRANDLPQMP
QLQVDIDSNKAVSLGLGLSDVTSTLSSAWGGTYVNDFIDRGRVKKVYIQGDSEFRSSPAD
LGKWFVRGSDNSMTPFSAFATTRWEYGPESLVRYNGSAAYEIQGENASGFSSGAAMDKME
ALANSLPAGTTWAWSGLSLQEKLASGQAMSLYAISILVVFLCLAALYESWSVPFSVILVI
PLGLLGAALAAWMRDLNNDVYFQVALLTTIGLSSKNAILIVEFAEAAVAEGYSLSRAALR
AAQTRLRPIIMTSLAFIAGVTPLAIATGAGANSRVAIGTGIIGGTLTATLLAIFFVPLFF
VLVRHLFTRKSRRQE
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atgttctcccgtttctttgtgcgcagacccgttttcgcctgggttatcgccattctgatc
atgctggccggtattctggcgattaaaacgctgccggttgcgcagtatcctgacgtggcg
ccgccgtcggtgaaaatctcggcgacctataccggcgcttccgctgaaacgctggaaaac
agcgtgactcaggtgattgaacagcagcttaccgggctggataacctgctctattttacc
tcgaccagcagttccgatggttcggtcagtattgatgtcacctttgaacagggcactgac
cctgacaccgcgcaggtgcaggtacagaacaaggtgcagcaggcggaatcccgcttgccg
agcgaggttcaacaatccggcgtcacggtggtgaaatcgcaaagtaacttcctgctgatt
gccgccgtgtacgataagtccgaccgggcgagcagctcagatatcgctgactggctggtg
agtaacgtacaggacccgctggcacgcgtggaaggggtcgggagcctacaggtgtttggt
gcggaatacgccatgcgtatctggctggacccggcgaaactggcctcctattctttgatg
ccgtcggatgtgcagagcgccattgaagcgcaaaacgttcaggtttccgccgggaaaatc
ggtgcgttaccttcccctgacacacagcaattgaccgctacggttcgcgcgcagtcgcgc
ttgcagacggtagaacaattcaaaaagatcattatcaaaagccagtctgacggggccgtg
gtacgcatccaggatgtggcgcgcgtggagatgggcagtgaagactacaccgccatcgct
aaactcaacggtcatccggctgcgggggttgcggtcatgcttgcgccgggggcgaacgcg
ctggataccgccacgctggtaaaagataaagtcgctgaatttaaacgggatatgccgcag
ggctatgacgtggcgtatccgaaagacagcactgaatttattaagatctccgtagaagat
gtggttcagacgctgtttgaagccatcattctggtggtctgcgtgatgtacctgttcttg
cagaatcttcgcgccacgctgattccggcgctggcggttccggtcgtgctgctcggtact
tttggcgtgctggcgctgtttggctactccatcaatacgctgacgctgtttgcgatggtg
ctggcgataggcctgctggtcgatgacgccattgtggtggtggaaaacgtcgagcgtatt
atgcgcgatgaagggctgcccgcgcgcgaagctaccgaaaaatcgatgggggaaatcgct
ggcgcgctggtggctatcgctcttgttttgtctgcggtattcctgccgatggcgttcttt
ggcggctctaccggcgtcatttatcgccagttttcagtgacgattatctcggcaatgctg
ctctcggttgtggtggcgttgaccctgaccccagccctgtgcggttcgattcttagccat
accgcgccgcataaaaagggcttcttcgggatattcaaccgattctatagccgaactgaa
cagggttatcagcgcggcgtcctgcatgtgctgcgtcgcagcgtcagcgtgatgggcgtt
tatgcgctgttatgcggggcgatggcgctggcgatgtggaagctgcccggcagcttctta
ccgaccgaagatcagggtgaaattatggtgcagtacaccctgcccgcaggggcgacggcg
tcgcgaaccgcagaggtcaatcgtcaggtgacagactggtttctcaataaagagaaggcc
aatacggacgttatttttaccgtcgatggttttagcttcagcggcagcgggcagaatgcc
gggatggcgttcgtttcgctgaaaaactggtcggagcgtaaaggcgaagaaaataccgca
caggctattgcgctgcgtgccagtaaagaactgggcgccattcgcgatgcgacgcttttt
gcgatgacgccgccgtcggttgaggggctggggcaaagcaacggcttctcttttgagctg
atggcgaatggggcgaccgatcgcgataccctgttacagatgcgtaatcagctgatcgcc
caggcaaaccagagcgatattctgcacgccgtgcgcgcaaatgacctgccgcaaatgccg
cagcttcaggtggatatcgacagtaataaggccgtctcgctggggcttggtttaagcgat
gtgaccagcaccttatccagcgcctgggggggaacctatgtcaatgactttatcgatcgc
ggtcgcgtgaagaaggtctacattcagggcgacagcgagttccgttcttcgcctgcggac
ctgggcaaatggttcgtgcgcggcagcgataacagcatgacgcccttttccgccttcgcc
actacccgttgggagtacggcccggaaagtctggtgcgctacaacggctctgccgcctat
gagattcagggagaaaacgccagcggtttcagctccggcgccgcgatggacaaaatggaa
gcgctggcaaacagcttgcctgctggcaccacatgggcgtggagcgggttgtcattgcag
gaaaagctggccagcggtcaagctatgagcttgtacgccatctctattctggtggttttc
ctctgcctggcggcgctgtatgaaagctggtcggtaccgttttcggtgattctggtcatc
cctctggggctgttaggcgcggcgctggcggcctggatgcgtgatttaaataatgatgtt
tacttccaggtcgcgctgctgaccaccatcggcctgtcgtcgaaaaacgccattctgatc
gtcgaatttgccgaagctgcggtcgcggaaggctattccctgagccgggctgcgctgcga
gcggcgcagacccgtttacgcccaatcattatgacctctctggcctttattgccggggtt
acgccgctggctatcgccacaggggccggggcgaacagccgtgtggcgatcgggaccgga
atcatcggtgggacattaaccgccacgctgttggctatcttcttcgtcccgctgttcttc
gtgctggttaggcatctgtttacccgcaagtcccgtcgtcaggagtaa
DBGET
integrated database retrieval system
