Citrobacter sp. CFNIH10: C2U53_04400
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Entry
C2U53_04400 CDS
T05324
Symbol
lpxC
Name
(GenBank) UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
cir
Citrobacter sp. CFNIH10
Pathway
cir00540
Lipopolysaccharide biosynthesis
cir01100
Metabolic pathways
Module
cir_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
cir00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
C2U53_04400 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
cir01005
]
C2U53_04400 (lpxC)
Enzymes [BR:
cir01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
C2U53_04400 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
cir01005
]
Lipid A
C2U53_04400 (lpxC)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
LpxC
DUF6225
Motif
Other DBs
NCBI-ProteinID:
AUZ63145
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All DBs
Position
complement(232016..232933)
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AA seq
305 aa
AA seq
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MIKQRTLKRIVQATGVGLHTGKKVTLTLRPAPANTGVIYRRTDLNPPVDFPADAKSVRDT
MLCTCLVNEHDVRISTVEHLNAALAGLGIDNIVIEVDAPEIPIMDGSAAPFVYLLLDAGI
EELNSAKKFVRIKETVRVEDGDKWAEFRPYNGFTLDFTIDFNHPAIDSSTQRYAMNFSAD
AFMRQISRARTFGFMRDIEYLQSRGLCLGGSFDCAIVVDDYRVLNEDGLRFEDEFVRHKM
LDAIGDLFMCGHNIIGAFTAYKSGHALNNKLLQAILAKQEAWEYVTFQDDAELPLAFKAP
STVLA
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaacaaaggacacttaaacgtatcgttcaggcgactggtgtcggtttacatacc
ggcaagaaagtcaccctgacattacgccctgcgccggccaacaccggggtcatctatcgt
cgcaccgacttgaatccaccggtagatttcccggccgatgccaaatctgtgcgtgatacc
atgctctgtacatgtctggttaatgagcatgatgtacggatttcaaccgttgagcacctt
aacgctgctctggcgggtttgggtatcgataacattgttatcgaagtcgatgctccggaa
atcccgatcatggatggcagtgctgctccgttcgtctacctgctgcttgatgccggtatt
gaagaactgaacagtgccaagaaatttgttcgcatcaaagagaccgttcgggtcgaagat
ggcgacaagtgggctgagttcagaccgtacaatggttttacgttggatttcaccatcgac
tttaaccatccggcgatcgactccagcactcagcgctatgcgatgaatttctctgctgat
gcgttcatgcgccagatcagccgcgcgcgtactttcggtttcatgcgtgatatcgaatat
ctgcagtcccgtggcttgtgcctgggcggcagcttcgattgtgccatcgttgttgacgat
tatcgcgtactgaacgaagacggcctgcgttttgaagatgaattcgttcgtcacaaaatg
ctcgacgccattggcgacctgttcatgtgtggtcacaacattatcggtgcatttaccgcg
tacaaatccggacatgcgctgaataacaaactgctacaggctattctggcaaaacaggaa
gcctgggaatatgtgaccttccaggacgacgcagaactgccgctggctttcaaagcgcct
tctaccgtactggcataa
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