Campylobacter insulaenigrae: CINS_0653
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Entry
CINS_0653 CDS
T03555
Symbol
ligA
Name
(GenBank) DNA ligase, NAD-dependent
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
cis
Campylobacter insulaenigrae
Pathway
cis03030
DNA replication
cis03410
Base excision repair
cis03420
Nucleotide excision repair
cis03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CINS_0653 (ligA)
03410 Base excision repair
CINS_0653 (ligA)
03420 Nucleotide excision repair
CINS_0653 (ligA)
03430 Mismatch repair
CINS_0653 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cis03032
]
CINS_0653 (ligA)
03400 DNA repair and recombination proteins [BR:
cis03400
]
CINS_0653 (ligA)
Enzymes [BR:
cis01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
CINS_0653 (ligA)
DNA replication proteins [BR:
cis03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CINS_0653 (ligA)
DNA repair and recombination proteins [BR:
cis03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
CINS_0653 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CINS_0653 (ligA)
MMR (mismatch excision repair)
DNA ligase
CINS_0653 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CINS_0653 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
BRCT
HHH_2
PTCB-BRCT
Nlig-Ia
DNA_ligase_ZBD
BRCT_2
Motif
Other DBs
NCBI-ProteinID:
AJC87623
UniProt:
A0A0A8H0C6
LinkDB
All DBs
Position
624050..626005
Genome browser
AA seq
651 aa
AA seq
DB search
MTYEEYLKNIKLANSWMRAYYEDDEPLASDDEYDKLIRKLKEFENLNKDKISKESPTQKI
APTLQSEFHKITHLSKMWSMEDVFDDKELRAWIKRAKSEYDFFIEPKFDGASLNLVYEDG
CLVSGATRGDGQIGENVTLNVKMIDNIPQTIAYKEKIEIRGEVVILKEDFERINQKRLKD
NLSLFANPRNMASGSLRQLDTKITKERNLKFFPWGVGYNTLNFIKHSQVMDFIRNLGFLK
DDFVFCCKDIAEVLKKYEELLNLRDKKPMMMDGMVVRVNDLKHCQLLGYTVKFPKFMVAF
KFPALEKTTTLLGINLQVGRSGVVTPVAILEPVNLDGVIVKSATLHNFDEISRLDLKIGD
SVSVIRSGDVIPKITKVFTQRRDGLELDITKPKICPECASELLDEGAFLKCQNLDCKARL
INSIIYFVSKKCLNIDGLGENIVELLFKEGKITNIESIFFLKYCDFENLEGFKERKITNL
LNAIQEAKNCSLSKFITALGIEHIGEVAAKKLANTFGFAWYQQNYDTYENLEGFGEQMAK
SLQEFIKVNCCRIEHFYKILNLEEEKNIRIHNEKISNKTFVITGTLSKPRDEFKQLLEQY
GAKVNSSVSKKTDFLLYGEDAGSKLQKAQDLGVKCINEIEFDEIIKDIGEI
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgacttatgaagaatatttaaaaaatataaaacttgcaaattcgtggatgagggcttat
tatgaagatgatgagcctttagcgagtgatgatgaatatgacaaacttattagaaaactt
aaagaatttgaaaatctcaataaagacaagattagcaaagaatctcctactcaaaaaata
gcaccaactttacaaagtgaatttcataaaattactcatttaagtaaaatgtggtcaatg
gaagatgtttttgatgacaaggaattaagagcttggattaaaagagcaaagagtgaatat
gatttttttatagagcctaaatttgatggtgctagtttgaatttagtttatgaagatggt
tgtttggttagtggagctacaagaggtgatggacaaattggtgaaaatgttactttaaac
gtcaaaatgattgataatattccacaaacaatagcttataaagagaaaattgaaattcgt
ggtgaagtagtaattttgaaagaagattttgaaagaattaatcaaaaaagattgaaggat
aatttaagtttgtttgctaatccacgcaatatggctagcggttcattaagacaacttgat
acaaaaataactaaagaaaggaatttaaaattttttccttggggagtgggttacaatact
ttaaattttataaaacattctcaagtaatggattttataagaaatcttggatttttaaaa
gatgactttgtattttgttgtaaagatatagctgaggtattaaaaaaatatgaagaattg
ttaaatttaagagataaaaagcctatgatgatggatggtatggtagtaagagttaatgat
ttaaagcactgtcaacttttagggtatacggttaaatttcctaaatttatggtagctttt
aaatttccagctttagaaaaaactacaactttacttggtattaatttacaagttggaaga
agtggagtggttactcctgttgctatattagaaccagtaaatctagatggagtcatagtt
aaatcggctactttacataattttgatgaaatttctagacttgatttgaaaataggtgat
agtgtaagtgtaatacgtagcggtgatgttattcctaaaattactaaggtttttactcaa
agaagagatggcttagaacttgatataactaaacctaaaatttgtccagaatgcgctagt
gaacttttagatgaaggtgcatttttgaaatgccaaaatttagattgtaaagctagatta
ataaattctattatttattttgtttctaaaaaatgtcttaatatagatggacttggtgaa
aatatagttgaacttttatttaaagagggaaaaattaccaatattgaaagcatttttttt
ctaaaatattgtgattttgaaaatttggaaggttttaaagaaagaaagattacaaatctt
ttaaatgccattcaagaagcaaaaaactgctcattgagtaaatttatcacagctttgggt
attgagcatattggtgaagttgcagctaaaaaactagctaatacttttggatttgcttgg
tatcaacaaaattatgatacatatgaaaatttggaaggttttggcgagcaaatggcaaag
agtttgcaagaatttattaaagttaattgttgtcgtattgagcatttttataagatttta
aatttagaagaagaaaaaaatataagaatacacaatgaaaaaatttctaacaaaactttt
gttatcacagggaccttatccaaaccaagagatgaatttaagcaattactggagcaatat
ggagctaaagtgaattctagtgtatctaaaaaaactgatttccttttatatggagaagat
gctggaagtaaattgcaaaaagcacaagacttaggggttaaatgcattaacgagatagaa
tttgacgaaattataaaggatataggtgagatttga
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