Citrus sinensis (Valencia orange): 102606766
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Entry
102606766 CDS
T02983
Name
(RefSeq) transcription factor GLABRA 3-like isoform X1
KO
K28363
basic helix-loop-helix transcription factor family protein
Organism
cit
Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cit03000
]
102606766
Transcription factors [BR:
cit03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
102606766
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH-MYC_N
bHLH-TF_ACT-like_plant
HLH
bHLH_IRO3
bHLH_SAC51
ACT_4
GAF_2
Motif
Other DBs
NCBI-GeneID:
102606766
NCBI-ProteinID:
XP_006476560
LinkDB
All DBs
Position
3:complement(join(1813342..1813437,1813537..1813902,1813985..1814845,1814953..1815009,1815242..1815256,1815390..1815486,1815580..1815840,1816205..1816332))
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AA seq
626 aa
AA seq
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MDTTKIQNQKRVPESLKKQLALAVRSIQWSYAIFWTISDTQPGVLEWGDGYYNGDIKTRK
TIQSVELSSNQLGLQRSEQLRELYESLSAGESHPQAASKRPSAALSPEDLTDTEWYYLVC
MSFNFNIGEGLPGRALANNQPIWLCNAQYADSKVFSRSLLAKSASIQTVVCFPHLHGVVE
LGVTELVLEEPDFIQHIKTSFMEIPCPMISGNSSSGAGNMRDDKDLACAALCSQNLDTTM
VPVVGYEVLEMASPDNNGSSGIKHNQPADYSFMVGGINGVASQVQSWQVMDDEFSNCVHS
VNSSDSISQTLVDATKCVSASKDDKKIGHCLQEVEECNPTELTSLDPQGHDLLYQSVLSS
LLKTSHQLVSRPHFQNHSQESSFASWKKGGLVSCKKQRDGVSQKLLKKILFEVPRIINYR
LLESSEDNHIKDDVSRLEAEETATNHVKSERRQRGKLNERFVILKSMVPSVSKFDKVSIL
DDTIEYVQELERKVKELESCRAKLEANYDNSKTSRAKKRKSRDIYESEPEFERFATADNI
NVSINEKDVQIEIKCPWREGMLLEIMDAISNLHLYSHSVQSSTNRGILSLTIKSERIKCR
ISWDNQTITTKSCLEVLNLGLYSEIV
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggatactactaagattcaaaatcagaagagagtgccagagagcctgaagaaacagctc
gctcttgctgtgagaagcattcagtggagctatgcaattttctggaccatttcagataca
caacctggggtcttggagtggggtgatggctactacaatggagatattaagacaaggaaa
acaattcaatcagtagagctcagttccaaccaattgggtttgcaaaggagtgagcaattg
agagaattatacgaatctctttcggctggtgagagtcatccacaagctgccagcaaaaga
ccatcagcggcattgtcccctgaagatcttactgataccgagtggtattacttggtttgc
atgtcatttaacttcaacatcggtgaagggttgccaggaagggcacttgcaaataatcag
cctatatggttgtgcaatgctcagtatgcagacagcaaagtgttcagtcgttctctgctg
gcaaagagtgcatctattcagacagtagtatgcttcccacatttgcatggtgtggttgag
ttgggggtaactgagctggtgttggaggaacctgattttattcagcacattaagacttca
ttcatggagattccatgtccaatgatttccggtaattccagtagcggtgctggaaacatg
agagatgacaaagatctcgcttgtgctgcactttgttcacagaatcttgacactacaatg
gttccagttgtgggttatgaagtgttagaaatggcttctccagataacaacggttctagt
ggcatcaagcacaatcaaccagcagattattcatttatggttggaggcataaatggggtg
gcttctcaagtacaaagctggcaagtcatggatgatgagttcagtaactgtgttcattcc
gtgaattctagtgacagcatttcccaaacacttgtagatgctacgaaatgtgtctctgct
tcaaaagatgataaaaaaattggccattgtttgcaagaagttgaagaatgtaatcccaca
gagctaacctcactggatccccaaggccatgatttgctctatcaaagtgtcctttcttcc
cttctaaaaacctcccatcagctagtttcgcggccgcattttcaaaaccacagccaagaa
tccagctttgccagttggaagaaaggtggattggtgagttgcaagaaacaaagagacgga
gtttcacaaaagttattgaagaagatcttatttgaagttcctcggataattaattacaga
ttgcttgagtcgtcggaagataatcacattaaagatgatgtttcgagactagaggctgag
gaaactgctactaaccatgtaaaatcggagaggaggcaaaggggaaagctaaatgaaaga
tttgttattctcaaatccatggtaccttcagtcagcaagtttgacaaagtatctatacta
gatgacacaatagaatacgtacaagagcttgagagaaaagtcaaagaattggagtcttgc
agagcaaagttagaggctaattatgacaacagcaaaactagtagagcaaagaagagaaaa
tctcgtgacatctatgagtcggagccagagtttgaacgttttgcgacagcagataatata
aatgtgagcataaatgaaaaggatgttcaaattgagatcaagtgtccatggagggaagga
atgttgctcgagattatggatgcaataagcaaccttcatttatattcccactcggttcag
tcatccaccaatcgaggcattctatctcttactatcaaaagtgagaggatcaaatgtcgc
atcagctgggataatcaaacaatcactacaaagagttgcttggaagtgttgaatcttggt
ttatactcagaaattgtttga
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