KEGG   Citrus sinensis (Valencia orange): 102617045
Entry
102617045         CDS       T02983                                 
Name
(RefSeq) nuclear pore complex protein GP210 isoform X3
  KO
K14314  nuclear pore complex protein Nup210
Organism
cit  Citrus sinensis (Valencia orange)
Pathway
cit03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:cit00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    102617045
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cit03019]
    102617045
Messenger RNA biogenesis [BR:cit03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     102617045
SSDB
Motif
Pfam: Ig_GP210_15th Ig_GP210_16th RRM_1 Big_2 Ig_NUP210_7th Ig_NUP210_1st RRM_7 Ig_NUP210_5th Ig_NUP210_2nd Ig_NUP210_3rd Ig_NUP210_15th RRM_PARP14_3 Ig_NUP210_16th Ig_NUP210_9th
Other DBs
NCBI-GeneID: 102617045
NCBI-ProteinID: XP_006470237
LinkDB
Position
2:join(6023936..6024111,6025377..6025642,6026277..6026443,6026540..6026756,6027473..6027819,6028001..6028180,6028332..6028470,6028561..6028709,6029604..6029715,6029809..6030404,6030554..6030677,6030797..6031074,6031986..6032096,6032243..6032305,6032793..6032984,6033667..6033726,6033799..6033867,6034071..6034217,6034326..6034445,6034668..6034787,6035356..6035511,6035593..6035655,6035797..6035930,6036337..6036748,6037111..6037210,6037306..6037418,6037504..6037575,6038123..6038198,6038971..6039078,6039192..6039333,6040806..6040880,6040967..6041189,6041292..6041358,6041453..6041544,6041770..6041830,6041912..6042236,6046706..6046746,6046864..6047027,6047123..6047222,6047370..6047539,6048521..6049084)
AA seq 2296 aa
MMFRFAFRFVLLLLVAVAAEGTSHLTSGPHVADVNILLPPKMTNPVEYRLQGSDGCFKWS
WDHHDILSVVPEYNSSNHCSTSARLRSIAPYSGRKETAVYATDAYSGTVIRCKVFIDNFS
RIQIFHSSIKLDLDGLATLRVRAFDSEDNVFSSLVGLKFMWQLMPETDGSSHHLLHVPLK
DSPLSDCGGLCGDLDVQIELENSGVFSDLYVVKGIGIGHEMVSVHLLETEFMHMADSILL
TVAEAMSIEPPSPVFVLVGAALQYKLKVIRGNIPQVVALPSPHQRWSVSNSSVAQVDNMM
GLTQALRLGQTAIIVEDTRVAGHTQVSSLNVVLPDTLWLYISPLSISGDPVEGTKAIPSV
ARWFVVSGFQYLIQMKVFSQGPGSQEIYITESDDIKLSDNQSECWRTFSMPNDLVLKHGW
RNSRILKATSQGLGKLTASLTYFSGLHDTKEVLKVVQEIMVCDRIKFSLDQTNGVSESIL
LPWAPGIYQEVELMATGGCAKTSSDYKWFSSDMATVSITASGVVQAKKPGKATVKVVSIF
DSFNYDEIVIEVSTPSSMVILRNFPVETVVGSHLQAAVTMKTLNGAYFYRCDAFSSSVNW
KAGSESFIVLNATKKQPFLDKLGTVEHDISLHGPPCSWAHLYASSSGRTMLHATLSKDYQ
HFDRSFDGPIVLKASSRIAAYPPLIVQQAGDGSGFGGYWFNLGQSETTTQMEALDKLYLV
PRTHVDVLLVGGPEPWEEDVDFIETFEIFNGKHNHASDGVHIHVVSGSSKNLYGVFCQTL
GTFELVFKRGNLVGDDHPLPAVAEVSLSVTCSFPASIALLVDEPVNERKVIQTAAQADRS
PGRIRVTRVTVANGQTIRIAAVGISSSGEAFANSSSLCLGWELSNCDGLAYWDDAYGSQK
SASSWERFLVLQNESGLCVVRATASGFCDANDGHHSAQLLEISESFLTDAVRLQLVSTLR
VNPEYNLLFFNPDAKANLSIAGGSCFLEAAVNDSQVVEVIQAPEGLQCLQLMLSPKGLGT
ALVTVYDVGLAPPRAASALVQVADVDWIKIMSGEEISLMEGRSQSIDLMAGIDDGSTFDS
FQYTYMDIRVHIEDHIVELIDDDATSSPDGGYFSMSSFKIMAKHLGITTLYVSARQQSGH
EILSQPIRVEVYAPPRIHPHDIFLVPGASYMLTLKGGPTVGVYVDYTSTDEEIATIHRSS
GQLFAISPGKTTLIATVFGNGDVVICQAFSSVKVGVPSSVTLNAQSDQLAVGHEMPIHPL
FPEGDVFSFYELCRNYNWTIEDEKILGFWLGDQLHSENQDLQSASSREIQFSNDLDKKEL
GFIKALYGRSAGRTDVATTFSCDFVSDSYSESRIYSASISLSVVSDLPLALGIPVTWVLP
PHYTSTSLLPSSSESHGQWDSQSRKGSIVYSLLKFCSEKNEAASKDDISIDGDTIKTTSS
NHLACIQAKDRSSGRIEIASCVRVAEVAQIRISNRYPLNVIHLAVGAECEIPISYYDALG
TPFHEAHNVILYHAETNYHDVVSINYTLNGSGKIYLKAKQHGRALVQVSMNRSPQKSDYV
LVSVGAQLYPQNPVLHVGGSLDFSVEGFSDQVSGHWFSDNESVVHVHMPSGKAEAVGIGS
TKVFFESPSMKLQTTVTVLSKNIVSIDAPKEVLTNVPYPTRGYTFAVRFGDTHKLKALEN
KAISYDCEADPPFVGYAKPWMDLDTGNLYCLFFPYSPEHLLRSVPKSKDTSPFISVSVNA
SLREAHRISGSASASALFVGGFSILEMDKSSLQLNLTSDSNKTTITILGNTGVEIHWQNQ
DLLKISHVHKEDIGIGGHAQYEVSVLRTKKFKDKIIFTLPANGQRVEVDVNFEPGQREES
NRIFASFIGFFAVFSLIVVFSIAILDGRKRSTRSQPSVSPATPYATAPGTPEHSIPTVSN
EQSPRTPQPFVDYVRRTIDETPNYRREARRRKIFIGGLARETSSAQFIKHFGKYGEITDS
VIMKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKK
IFVGGIPSSVNEDEFKDFFMQFGEVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG
NKLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGGGGFAGGGFGG
SGGGGGGGGYRSSGAYGVRGGGYGGYGVGGEFGGYGGYGGGMGAYRGEPSSLGYSGRYGG
FNRGYDVTGDYGGLNESYGGYGGSGVGGGGGYGGGPSGYDIGLGSSYGGSSGGAFFGSRG
GYGGAGGSSRYHPYGR
NT seq 6891 nt   +upstreamnt  +downstreamnt
atgatgttccggttcgcatttcggttcgttttgttacttctggtggcggtggccgccgaa
gggacgtcgcatttaacgtccggaccgcacgttgctgatgtcaacatacttttgccgcct
aaaatgacgaatcctgttgaataccggcttcaaggaagtgatggctgctttaaatggtca
tgggatcatcatgatatcctatctgttgtacctgaatataattcaagcaatcactgctca
acaagtgcacgcttgagatcaattgccccctatagtggtcggaaggagacagcagtttat
gctactgatgcttactctgggactgtaattcgctgcaaagttttcattgacaacttttcc
agaatccagatatttcatagttctattaaacttgatctagatgggcttgctactcttcgt
gtgcgtgcctttgacagtgaagataatgtcttttcttcattggtgggtttaaagttcatg
tggcaactaatgcctgaaactgatggatcatctcatcaccttttacatgttcctttgaag
gattctccccttagtgactgtgggggattatgcggcgacttagatgtgcaaatagaactt
gagaatagtggtgtattttcagatttgtatgttgtaaaaggaattggaatcggccacgag
atggtatctgtgcatttacttgagacagaatttatgcacatggctgatagcattcttcta
acagttgcggaagccatgtcaatcgaaccaccttcaccagtttttgtccttgttggtgct
gcactgcaatataaacttaaagtaattcgtgggaatattcctcaagtggttgctctgcca
tctccgcatcaacgttggtctgtttcaaactcttcggttgctcaggtggacaatatgatg
ggtttaactcaagctctgaggttagggcaaacagctatcattgttgaagataccagagtt
gctggccacacacaagtgtcttcacttaatgtggttcttcctgacactttatggttatac
atttcacctctgtctatttctggtgatcctgttgaaggaacaaaagccattccttctgtt
gctcgttggtttgttgtttctggttttcagtatcttattcagatgaaagttttctcccaa
ggacctggttcacaagagatctacattacagagagtgatgatattaaactatctgacaac
caatctgaatgctggagaactttttcaatgccgaatgatcttgtgctcaaacatggctgg
cgaaattctagaatcctgaaagcaacttcacagggactaggaaaattgacagcttcttta
acatattttagtgggcttcatgatacaaaggaggttctgaaggttgtgcaagaaataatg
gtatgtgaccgaattaagttcagtttggatcagacaaatggcgtgtctgagagcattctc
ctcccatgggcccctggtatttatcaagaagtagagctgatggctacaggaggttgtgct
aaaacatccagcgactacaaatggttttcttcagacatggctactgtgtccataactgct
tctggagttgtccaggcaaaaaaacctgggaaagcaactgttaaagtggtgtccattttt
gattcattcaattatgatgagattgttattgaagtttccaccccatcctctatggttata
ctgcgaaacttccctgttgagactgtagtaggatcacatcttcaagcagctgtaacaatg
aaaacattaaatggtgcttatttctatagatgtgatgcttttagttcttcagtgaattgg
aaagctggaagtgagtctttcattgtactcaatgcaacaaagaagcagcctttcttggat
aagctagggactgttgaacatgatatatctctccatggtcctccctgttcatgggcccat
ttatatgcttctagttctggccgaaccatgctacatgcaacactttccaaggattatcag
cacttcgatcgttcttttgatggacctatagtcttaaaagcttcttcacgtattgcagct
tatccaccacttattgtgcaacaggcaggtgatggaagcggatttggtggttattggttc
aatctgggtcaatcagaaaccactactcaaatggaggctctggataagttgtatcttgta
ccgagaacacatgttgatgttttgcttgttggaggaccagagccatgggaggaagatgtt
gacttcattgagactttcgagatcttcaatggcaagcataaccatgcaagcgatggtgtt
catatacatgttgtttctggaagctccaagaatttatatggagttttctgccaaactctg
ggaacctttgaactagtttttaaacggggaaatttggtcggagatgaccatcctctgcct
gcagttgcagaagtttcactctctgttacatgcagctttcctgcatcaattgcgctgcta
gttgatgaacctgtgaatgaacgtaaagttatacagactgcagctcaagctgaccgtagc
ccagggagaatacgtgtcactcgtgttactgttgcaaatgggcaaactattcgaatagct
gcagttggcatcagtagctctggggaagcttttgccaactcatcttctctttgtttgggg
tgggaactgagcaattgtgatggattggcatactgggacgatgcttatggttcacagaag
tcagcatccagttgggagaggtttttggtcttgcaaaatgaatcaggactgtgtgttgtt
cgtgccactgcttctggtttctgtgatgctaacgatggtcatcattctgctcaactgctt
gaaatttcagagagttttcttactgatgccgtacgcttacagcttgtttccactctaaga
gtcaacccggagtacaacttgttattttttaaccctgatgctaaggcaaatctgtctatt
gctggtgggagttgtttcctggaggctgctgtaaatgattctcaagtggtagaggtcatt
caggctccagaaggtttacagtgcttacaattgatgctatctccgaaaggattgggaact
gcacttgtgactgtttatgatgttggacttgctcctccacgtgcagcttcagctctggtc
caagttgctgatgtagactggattaagatcatgtcaggcgaagaaatcagcctcatggaa
ggtcgatcacaatctattgatttaatggctgggatcgatgatggaagtacttttgactct
tttcagtacacttacatggatattcgtgtacatattgaggatcatattgttgaactcata
gatgatgatgctacctcaagtcctgatggtggatattttagcatgtcgagttttaaaatt
atggctaaacatcttgggatcacaactctttatgtcagtgctagacagcaatctgggcat
gaaatattgagtcaacctataagggtagaagtctatgcaccaccgagaatacaccctcac
gatatttttctggtacctggtgcatcttatatgcttaccttgaaaggaggcccaactgtc
ggtgtatatgttgattatactagtacagatgaagaaatagcaacgatccacagatcatct
ggtcaactgtttgccatttcaccagggaaaactaccctcattgccacggtttttgggaat
ggagatgttgtaatttgccaagctttcagcagtgtgaaagttggagttccttcttcagtg
acattgaatgcgcagagtgaccaacttgctgttggccatgagatgcccatacatcctcta
tttcctgagggtgatgtgttttctttttatgagctctgcagaaattacaactggaccata
gaagatgaaaagattttgggtttttggctgggggatcaactgcacagtgaaaatcaagat
ttacagtcagcttcttcacgggaaattcaattttctaatgacctggataagaaagaactg
ggttttatcaaagccttgtatggaagatctgctggcaggacagatgttgcaactactttc
tcatgtgattttgtgtctgactcatactcagaatcaaggatttacagtgcatcgatatca
ctatctgtggtgtctgatctccctcttgcacttggaattccagtaacatgggttctcccc
ccgcattatacttcaactagtcttttgccttcatcatcagaatcacatggccaatgggat
agtcagagtcgcaaaggatcaattgtctactctttattgaaattttgtagtgaaaagaat
gaagctgcaagcaaggatgatatttccattgatggggacacaataaaaacaaccagtagt
aaccatctagcatgcatccaggcaaaagatcgatccagtggaagaattgaaattgcttca
tgtgtcagggtggctgaggtggctcaaataagaatcagcaatagatatccattgaatgta
attcatcttgctgttggtgctgaatgtgaaattccaataagctattatgatgctttaggg
actccttttcatgaagcacataatgtcatactctatcatgcggaaactaactatcatgat
gttgtctctattaactatacactcaatggtagtgggaaaatctatcttaaggcaaagcaa
catggtagagctctcgtgcaagtatcaatgaacagaagtccacaaaagtctgattacgtt
ttggtttcagttggagcgcaactatatccacagaatccagtcctccatgttggaggtagt
ctcgacttcagtgtggaaggttttagtgatcaagtttctggccactggtttagcgataat
gaaagtgttgtacatgtgcacatgccatctggcaaagctgaagcagttggaataggttca
accaaagtattttttgaatctccaagtatgaaactgcaaacaacggttactgttctatca
aaaaacattgtttccatcgatgctccaaaggaggtgctaacaaatgttccttacccaacc
agaggatataccttcgctgtgagattcggtgatactcacaagttgaaagctcttgaaaac
aaagcaatctcatatgattgtgaggcagatcctcctttcgtcgggtatgcaaaaccgtgg
atggatctggacactggtaacttgtactgtctcttcttcccttactctccagagcatttg
ctccgttccgttccaaagtcgaaggacacgagcccatttatatctgtctctgtcaatgct
tcactgagagaagcacaccgtatttctggatctgcatcagcatctgcactttttgttgga
ggattttcaatattggagatggacaagagttcgttgcaattaaatctgacatcagactca
aacaagactaccataactatcctgggaaatacaggtgttgaaatccactggcaaaatcaa
gatctgttgaagattagtcatgtccataaagaagatattggaattggtgggcatgctcaa
tatgaggtttcagtgctaagaaccaagaaattcaaggataaaatcattttcacacttcca
gccaacggtcagagagtggaagtagatgttaactttgaacctgggcaaagagaagaatca
aacagaatatttgcaagctttattggtttctttgctgtattttcattgatagtggttttc
agtatcgctatcttggatggacggaagagatccaccagatctcagccatctgtttctcct
gccactccatatgcaacagcacctggtacgcctgagcatagtattccgacggtttcaaat
gaacagtctccccgaacgccacagccttttgtagattatgtgagaagaactattgatgaa
actcccaactatagacgagaagctaggaggagaaaaatttttattggaggtttagctaga
gagacgtcgtcagctcaatttatcaagcatttcggtaaatatggtgaaattacggattct
gtgataatgaaggaccggaaaacagggcagcctcgtggatttggctttgttacttatgct
gatccctctgtagttgataaagtcattgaagacactcacattattaatgggaaacaggtg
gaaattaagcgaacaattccaaaaggggctgttggctctaaggatttcaagacgaagaag
atttttgtaggtggaattccgtcatcagtgaatgaagatgaatttaaggacttctttatg
caatttggagaggtacaagagcaccaaatcatgcgggatcattctaccagtcgatctcgt
ggttttggatttatcacttttgacacggagcaagcagttgatgaccttttggcaaagggg
aacaagcttgagttggctggagcccaggtggaggtcaagaaagcagaaccaaagaaacca
aacctaccacaaccatcttataggcgatacaataatcctaaacccgcatatggtagtggc
tttggagatgcttacggtggatatggaggtggtggctttgctggcggtggctttggtggc
agcggcggtggaggtggaggcggtggttataggtctagtggggcatatggtgttagaggt
ggtggatatggaggatacggtgttggtggtgaatttggtggatatggaggatatggtggt
ggtatgggagcatacaggggagagccctcctcccttgggtactctggtcgctacggaggc
tttaaccgaggctacgatgtaactggtgattatggtggcctcaatgagagttatggggga
tatggtggcagtggtgttggtggcggcggcggctatggaggcgggccgagtggttatgac
atcggcctcgggagtagttacggaggtagcagcggaggcgccttctttggaagtagaggg
ggatatggtggtgcaggggggagcagtcggtatcatccttatgggcggtag

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