KEGG   Citrus sinensis (Valencia orange): 102621258
Entry
102621258         CDS       T02983                                 
Name
(RefSeq) uncharacterized protein LOC102621258
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
cit  Citrus sinensis (Valencia orange)
Pathway
cit03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cit00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    102621258
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cit03041]
    102621258
Spliceosome [BR:cit03041]
 Complex A
  U2 snRNP components
   U2 related factors
    102621258
 Complex B
    102621258
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    102621258
SSDB
Motif
Pfam: SMN_Tudor TUDOR Agenet DUF4763 SUS_EPBD
Other DBs
NCBI-GeneID: 102621258
NCBI-ProteinID: XP_006470830
UniProt: A0A067DGF4
LinkDB
Position
5:complement(join(938534..938698,938776..938904,939124..939294,939377..939452,939554..939636,940044..940163,940813..940881,941422..941496))
AA seq 295 aa
MQGGEELSIEELFSNLSTYKEQLQQVRELLVHDPGNSEYADMEKELSEVIALTEELLATA
KQNAISVSETGTSASASPNLLQSKENKTESGSISDNQEKLAVGTKVQAVYSEDGEWYDAT
IEAITPNGYYVTYDSWGNKEEVDPANVRPVNLLVEAEKVAEATKLAIKRKIEQAAASDFQ
SKSLPAKLHINPDDPEDVKAAKRKKIHAFKSKMRFEQLEVTQNKRQNAWQQFQTTKGKTK
KVGFFSGRKRESIFKSPDDPYGKVGVTGSGKGLTDFQKREKHLHLKGGGIADTDD
NT seq 888 nt   +upstreamnt  +downstreamnt
atgcaaggaggagaagagctgagcattgaagagctcttttcaaatctttctacttataaa
gagcagcttcaacaggtcagagagctgttggttcatgatcctggaaactctgaatatgct
gacatggaaaaggagctgtctgaggtgattgccttgacagaggaactccttgcaactgca
aagcaaaatgctatttctgtatctgaaactgggacaagtgccagtgcatctcctaattta
ctccagtctaaggagaataaaacagaatcaggaagcatatctgataatcaagagaagctt
gcagtgggcaccaaagttcaagctgtatatagtgaagatggggaatggtatgatgccact
attgaggcaatcacgccgaatggatactatgttacttatgacagttggggaaataaggaa
gaggtggaccctgccaacgtaaggcctgtcaatctattggtggaagctgagaaggtagct
gaagctactaaactagctatcaaacggaagattgaacaagctgctgcatctgactttcag
tctaaaagcttgccagcaaaacttcatataaatcccgatgatccggaggatgtgaaagcg
gcaaagcgtaagaagatacatgcttttaagtcaaagatgcgattcgagcaacttgaagta
acccaaaataaacgtcaaaatgcatggcagcagttccagactacgaaaggcaagactaag
aaggttggtttcttctctgggcgcaaacgagagagcatcttcaagtctcccgatgatcct
tatggtaaggttggtgtaacgggaagcggaaagggcttgacagattttcagaagagagaa
aagcacttacatctaaagggaggtggaattgccgatactgatgattag

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