KEGG   Citrus sinensis (Valencia orange): 102628315
Entry
102628315         CDS       T02983                                 
Name
(RefSeq) structural maintenance of chromosomes flexible hinge domain-containing protein GMI1
  KO
K23113  structural maintenance of chromosomes flexible hinge domain-containing protein 1
Organism
cit  Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:cit00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cit03036]
    102628315
   03400 DNA repair and recombination proteins [BR:cit03400]
    102628315
Chromosome and associated proteins [BR:cit03036]
 Eukaryotic type
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    102628315
DNA repair and recombination proteins [BR:cit03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     102628315
SSDB
Motif
Pfam: HATPase_c_3 DivIC HATPase_c
Other DBs
NCBI-GeneID: 102628315
NCBI-ProteinID: XP_052294913
LinkDB
Position
3:complement(join(17442580..17442796,17442915..17443235,17443363..17443554,17443650..17443845,17445397..17445511,17445827..17445967,17446047..17446328,17446406..17446491,17446731..17446797,17447718..17447816,17448619..17448710,17448845..17448953,17449068..17449242,17450208..17450317,17450430..17450747,17451197..17451313,17451427..17451541,17451652..17451673,17451828..17451986,17452188..17452370,17452508..17452583,17452916..17452950,17453068..17453158,17453384..17453512,17453617..17453678,17453787..17453922,17454059..17454109,17454609..17454695,17456202..17456270,17456398..17456503,17456618..17456673,17456866..17456938,17457487..17457570,17458218..17458273,17458397..17458483,17458568..17458600,17458689..17459078,17460219..17460221))
AA seq 1579 aa
MLIMAAAESSLKRPTKRKWENAPYDRDEALPNKKSIRGQCRYKFKILFPNGATIDLLLID
PKHKMAVTDFICLVKDEYFKSWMRHDSMKRKRKINWNGGNLYVEDANLNKISDTINFEMF
EPSKCHILKLYDGSGEIAKTFENMWDLTPDTDLLRELPEDYTFETALADLIDNSLQAVWT
NAKNERRLISVNIAEDKISVFDTGPGMDSTDENSIVKWGKMGASLHRASKAQGIGGKPPY
LTPFFGMFGYGGPIASMHLGRRALVSSKTKVSKEVYTLHLEKEALMRCSDAELTWRTNGG
IRFPSKDEIADSPHGSFTKVEIWEPKLKSLDVKPLGCKLKDIYFPYIQCDEISSTGKTTR
PIEFQVNGIDLAEVAGGEVAITNMHSCNGPDFILQLHFSLRQASATTNSPGSWPSKEANA
RLKFVYFPVTEEGESIDIIMNKLISEGCVAAANYDTCSRVSIRRLGRLLPDVHWAWLPLM
DLRQRKGEKAHLLKKFCLRVKCFIDTDAGFNPTPSKTDLAHQNLYTIALKNFGAKTFKEE
KDVNVEIRRDGKLLTPIQLEKDYQEWLLNMHDHYDAEKDCGVDQPILLVGHKNIKPLVIS
TDVARVHKVVKKKGAMWKSGQKVKLLKGAYAGIHNNDVYATIEYFVIEGLQGDAGGEARI
ICRPLAVPDEKGCVLAVNNGNASLHIGSSLSLPIGVIDSEKCVPVNKNVWDQQLEKYRQK
SPSTIELLKETQCQELEIDGVLPSSAIAGQNPPREIVAVVRPASFISSSASKNLVQKYIV
KNSSEMLMEVKFKCEDENLEDVVPLYTARVAPSSRKGYQGLYIFEVGCKFPKLFQNAGAY
TFSFHLTETSCKSCEKKVLVKGSSEVGKWKLLDTKERPELRVRVGSFLPPLSVACYDIYD
NRIPFESKPQFLVKIKPSKIIKVEDKLKWNLSPDKLTLNIQDILVASSKLDEIRPDYRAT
LVISSKDKPVSVSIPCRVTPGSLKNVAVHPQNLGILLPGSVIKMLKLEMFDAFYNNVKKG
LEVELNVDGFCIEDQLGLRRKVDGYGCIDLSGLLKVKAGYGKNVSLSVLSDNGVIFKQDF
QTEKRELRVISGVPECCTVGSQLEDITFEIVDSKGAVDVTIHDDDKSGQSHTLTIKSDLI
NTENSIRYAFRQGRCTVPAISLPQNEGCFCFVATHSQYTELNTSIKVPIVRAPKLESDDI
RTPCSGGKVFLLEGPSPIKHVGNHMVPIMKIVNELESEVRNYGLCIGRHEKALKLLNDQK
MEVEEVLSKLQVSVEPYSLLTKEEIIRRIKSIYQSAASVICCSTKEFLYSKPRSNFMEDV
VGPVALIGTVCTNKLSRTLAEYLGEHQMLALVCRSFEAAFALEKYEQDGTIDRKCALHAT
AAALGKSIDGRYLVICLEGIRPYSGKFGSNDPQRKLALPAPTLPKGNIPAGFVGYAVNMV
NLDDHHMHIRTSAGNGLRETLLYRLFGKLQVYKTRKDMIEAHTCIRHGAVSLDGGILKED
GIISLGCGNPTICFPIVRTRISTQSIEALKQIEEKKLELDGIMQSIQESNKALEKDLEKL
KNSEDKFNSFMDLWQTSLK
NT seq 4740 nt   +upstreamnt  +downstreamnt
atgttaattatggcggcggcggaaagctcgttaaagcgaccgacgaaacggaaatgggag
aatgcgccgtatgatagagacgaggctctaccgaacaagaaatccatcagaggacagtgt
cggtataaattcaaaatattgtttccgaatggagctactatagatttacttctgatagat
cccaagcataaaatggccgttacggactttatttgtttggtgaaagatgagtatttcaag
tcttggatgcgacacgattcaatgaagagaaaaaggaaaataaattggaatggtggaaat
ttatatgtggaagatgcaaatttgaataagataagtgatacaataaattttgagatgttt
gagccctccaagtgccacattttaaagctatatgatgggtctggtgagatagccaagact
tttgagaacatgtgggatttgactccagatactgatttgctgagggagctgcctgaagac
tacacttttgaaactgctcttgcggatttaattgataattccttgcaagcagtgtggaca
aatgccaaaaatgagcggagactcattagtgtgaatattgctgaggataagatttcagtt
tttgacactggcccaggaatggatagcactgatgaaaactctattgtgaagtggggaaag
atgggtgcctcacttcacagagcttctaaagcacaaggaatagggggcaaacctccttat
ttaacgccattttttggcatgtttggatatggaggacccatagcgtctatgcatttagga
aggcgtgccttagtttcttcaaagacaaaagtttctaaggaagtttatactttgcatctt
gagaaagaggctttaatgaggtgttctgatgctgaactcacttggaggactaatggcggc
atcaggtttccttcgaaagatgaaattgcggattcacctcatggaagttttacaaaggtg
gagatatgggagcctaaactaaaaagcttggacgtaaagccactcggatgcaaattaaag
gatatctattttccctatattcagtgtgatgaaatttccagtacggggaagaccaccaga
ccaattgagttccaggttaatggcattgatttagctgaagttgctggtggggaggttgca
ataaccaacatgcactcttgcaatggtcctgattttatcttacaacttcatttttccctt
aggcaagctagtgctactaccaacagtcctggttcatggccatcaaaagaagcaaatgca
cgcctcaagtttgtttattttcctgttacagaggagggagagagcatcgacataattatg
aataagctgatttctgaaggatgtgtggctgctgcaaattatgatacctgtagtcgtgta
tctattcgtaggcttggtcgtctacttcctgatgttcactgggcatggcttcctttaatg
gatctgaggcagaggaaaggagaaaaagcccacttgttgaagaaattttgcttgagagtt
aaatgtttcattgacaccgatgctggtttcaatccaacaccttctaagactgatctagca
catcagaatctatatacgatagctctgaagaattttggtgctaagactttcaaggaagaa
aaagatgttaatgttgaaattcgtagagatgggaaattgttaactcccattcaactggag
aaggactatcaagagtggcttctgaatatgcatgatcattatgatgcagaaaaggattgt
ggagtggatcaaccaattcttcttgtcggccacaaaaacattaagccactagtcatttca
actgatgttgccagggtgcataaagtagtaaagaagaagggagcaatgtggaaatcaggc
caaaaagtcaaactactaaagggagcatatgctggaatccataataatgatgtgtacgcg
acaatagaatattttgtaattgaaggattgcaaggggatgctggtggggaagctcgaatt
atatgcaggccactagctgtcccagatgagaaaggctgtgtccttgcagtgaataatggg
aatgccagtttacatattggaagctccttatctctacctattggtgtcattgattctgaa
aagtgtgtacctgttaacaaaaatgtttgggatcagcaactggagaaatatcgccagaag
tctccatctacaattgagttgttgaaggagacgcaatgtcaggagttggagattgatggg
gttttacctagcagtgctattgctggacaaaatcctcctagagaaattgtggctgttgtt
cgacctgccagttttatttcttctagtgcttcaaagaacttggttcagaagtatattgtt
aagaatagttcagagatgctcatggaagtcaagttcaaatgtgaagatgagaatcttgaa
gatgtagtccccctttacacagctcgcgtagcaccttcttctcggaaaggataccagggt
ttatatatatttgaagtgggttgcaagttccctaaattatttcagaatgctggtgcatat
acattttcattccatcttactgagacaagctgcaagagttgtgagaaaaaggtgctagtt
aagggatcttctgaggttggaaaatggaaacttttggatactaaagagagaccagagtta
cgtgttagagttggttcattcttacctccgttatctgttgcgtgctatgacatttatgat
aatcggattccgttcgagtctaagccacaatttttggtcaaaattaagccaagcaagatt
attaaggttgaagacaagttgaagtggaacctctcacctgataaattgacgctaaatatt
caggacattctggttgcaagctccaagttggatgagattcggccagattatagagctact
ttggtgatatcttcaaaagataaaccagtgtccgtatcgattccatgtcgagtcactcct
ggatctttaaagaatgtagcagtccatccacaaaatttgggtatcttgcttccgggctct
gtgattaaaatgctcaaattggagatgtttgatgctttttataataatgttaagaaaggc
ttggaggttgaacttaacgttgatggattttgtatcgaagatcaattgggcttaaggcga
aaggtggatggttatggatgcattgatcttagtggcctattgaaagtaaaggctggttat
ggaaaaaatgtgtcactttctgttttatctgataatggagttattttcaagcaagatttt
caaactgagaaaagagagctgagagtcatatcaggggtgcctgaatgctgtaccgttggt
tctcaactggaagatataactttcgaaattgttgattccaagggtgctgttgatgtaact
attcatgatgatgataaaagtgggcagtcccatactcttacaataaagtcagacttaatt
aacacagagaattcaattcggtatgctttcaggcaaggtcgatgtactgtccctgctatt
tccctacctcagaatgaggggtgcttttgctttgtagccacgcactctcaatatacagag
ctaaatacaagcatcaaggtacctattgtccgagcaccaaaactggagtctgatgatatt
agaactccatgttctggtggaaaggtttttctccttgagggtccatctccaatcaaacat
gttggaaaccatatggtgcccatcatgaaaattgtgaatgaacttgagagcgaagtgcgc
aactatggtttatgcatcgggcgtcacgagaaggcactgaaattgctcaatgatcagaag
atggaagttgaggaagtgctatccaagttgcaagtttcagttgagccatactccttgttg
acaaaagaagaaatcataagacggattaaaagtatatatcaatctgctgcctcagttatc
tgctgttctaccaaggagtttctgtacagcaaaccacggtcaaatttcatggaagatgta
gttggtccagttgctctaattggtacagtctgcaccaacaagcttagcaggacattagca
gagtacctgggggaacatcaaatgcttgctttggtgtgtagatcttttgaagcagcattt
gcacttgagaagtatgaacaagatggaactatcgatcgtaagtgtgcgctacatgccaca
gcagctgcacttggaaagtctattgatggcagataccttgttatatgccttgagggtata
aggccgtactctgggaagtttggaagcaatgacccacaaaggaagttagccttgccagca
cctaccttaccaaaaggaaatatccctgcaggttttgtgggatatgcagttaatatggtt
aacctagatgaccaccacatgcacataagaacaagtgcggggaatggtcttcgggagact
ttattgtatcgactctttggcaagcttcaagtgtataaaacccgtaaagacatgatagag
gcgcatacttgtataagacatggtgctgtatctctggatggtgggatcttgaaagaggac
ggtatcatctctcttggatgtgggaatcctacaatatgtttccccattgtcaggacccga
atatctactcaaagcatcgaagcattgaagcaaattgaagaaaagaagttggagttggat
gggatcatgcagtcgatacaggaatctaataaagcccttgagaaagatttggagaagctt
aaaaatagtgaagataaatttaattcgtttatggatctttggcaaaccagtcttaaatga

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