Citrobacter sp. LUTT5: GUC46_15550
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Entry
GUC46_15550 CDS
T10487
Symbol
rlmC
Name
(GenBank) 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
citr Citrobacter sp. LUTT5
Brite
KEGG Orthology (KO) [BR:
citr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
citr03009
]
GUC46_15550 (rlmC)
Enzymes [BR:
citr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
GUC46_15550 (rlmC)
Ribosome biogenesis [BR:
citr03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
GUC46_15550 (rlmC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_25
Cons_hypoth95
Methyltransf_15
Methyltransf_12
Methyltransf_ANTKMT
Methyltransf_4
Methyltransf_11
UPF0020
Methyltransf_37
Methyltransf_32
Motif
Other DBs
NCBI-ProteinID:
QHI83643
LinkDB
All DBs
Position
complement(3209550..3210677)
Genome browser
AA seq
375 aa
AA seq
DB search
MQCALYDAERCRSCQWITQPVADQLFAKTADLQNLLADYPVGEWCAPVSGPESAFRNKAK
MVVSGSVEKPLLGMLHRDGTPEDLCDCPLYPESFAPVFSVLKPFIARAGLTPYNVARKRG
ELKYLLLTESRFDGGMMLRFVLRSEAKLAQLRAALPWLQAQLPQLKVITANIQPVHMAIM
EGETEIFLTEQQALAERFNDVPLWIRPQSFFQTNPVVAGQLYATARDWVRQLPVNHMWDL
FCGVGGFGLHCATPQMKLTGIEIAPEAITCAKQSAQELGLQNLHFQALDSTQFATAQGEV
PDLVLVNPPRRGIGKPLCDFLSRMAPRFIVYSSCNAQTMAKDIRELPGYRIERVQLFDMF
PHTSHYEVLTLLSRQ
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgcagtgcgcactttatgacgccgaacgctgtcgctcctgtcagtggataacacagcct
gtcgccgatcaactcttcgctaaaacagccgatctgcagaatctgctggccgattatccg
gtcggagaatggtgcgcgccggtcagtggtccggaaagcgcgtttcgcaataaagccaaa
atggtggtcagcggcagcgtggaaaaaccgttgctggggatgttgcatcgtgacggtacg
ccggaggatttgtgcgactgtccgctctaccctgagtcttttgcgcccgtattttccgtt
cttaagccgtttatcgcccgagcaggattaacaccctataacgttgcgcgtaaacgcggg
gaactgaaatatttgctgttaacggaaagccggttcgatggcggcatgatgctgcgtttt
gtcctgcgttctgaagcaaaactggcacagctgcgcgcggcgctgccctggctgcaggca
caactcccacagttaaaagtgatcactgccaatattcagccggtgcatatggcgattatg
gaaggggagacagaaatcttcctgacggaacaacaggcgctggcggaacgctttaacgat
gtaccgttgtggatccgcccacagagcttcttccagactaacccggtggtggcggggcag
ttgtatgccacggcgcgcgactgggtgcgtcagcttccggttaatcacatgtgggatctg
ttttgcggcgttgggggttttggtctgcactgcgctacaccgcaaatgaaactgacgggg
attgaaatcgcgccagaggcgattacctgcgcgaagcagtcggcgcaggaacttgggttg
cagaatctgcattttcaggcgttggattcaactcagtttgctaccgctcagggcgaagtt
ccggatctggtgctggtgaatccgccgcgtcgcgggattgggaaaccgctgtgcgatttt
ctttcccgcatggcaccgcgttttattgtttattccagctgtaatgcgcaaaccatggcg
aaggatattcgtgagttgcctgggtatcgaattgaacgcgttcagcttttcgatatgttc
ccgcacacctcgcattatgaagtgttaacgctgctcagccgacaataa
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