KEGG   Clostridium innocuum: G4D55_16940
Entry
G4D55_16940       CDS       T06525                                 
Symbol
vanR
Name
(GenBank) VanR-ABDEGLN family response regulator transcription factor
  KO
K18349  two-component system, OmpR family, response regulator VanR
Organism
ciu  Clostridium innocuum
Pathway
ciu01502  Vancomycin resistance
ciu02020  Two-component system
Brite
KEGG Orthology (KO) [BR:ciu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    G4D55_16940 (vanR)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    G4D55_16940 (vanR)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:ciu02022]
    G4D55_16940 (vanR)
   01504 Antimicrobial resistance genes [BR:ciu01504]
    G4D55_16940 (vanR)
Two-component system [BR:ciu02022]
 OmpR family
  VanS-VanR (VanE type vancomycin resistance)
   G4D55_16940 (vanR)
Antimicrobial resistance genes [BR:ciu01504]
 Gene sets
  Vancomycin resistance modules
   Vancomycin resistance, D-Ala-D-Ser type [MD:M00652]
    G4D55_16940 (vanR)
SSDB
Motif
Pfam: Response_reg Trans_reg_C PDE8A_N MarR_2 Alpha-amylase_N IMS_HHH
Other DBs
NCBI-ProteinID: QIX10646
LinkDB
Position
complement(3484760..3485455)
AA seq 231 aa
MDMNILVVDDEKEIAGLVEIYLKNENYKVDVCYTGTQALQNIRTRSYDLAILDVMLPDMD
GFSICRTIRQNYTWPIIMLTAKEQDIDKINGLMIGADDYMTKPFQPLELIARVKAQLRRY
KRYNVQQKAKELSYLGLVMNQEQHICRLNEKDLNLTPIEFRLLWYLCERQGKVVSARELY
TAIWQEEYLSSSNNTLMVHIRHIREKMKDRGEHPRYIQNVWGVGYKLGETL
NT seq 696 nt   +upstreamnt  +downstreamnt
atggacatgaatatactggtagtggatgatgaaaaggaaattgccgggcttgtggaaatt
tatttaaaaaatgaaaattataaggtggatgtatgctatacagggacacaggctctgcag
aatatacggacacgttcctacgatctggccatattggatgtcatgcttccggatatggat
ggctttagcatttgtaggaccattcgtcagaactacacatggcccattatcatgctgaca
gcgaaggagcaggatattgataaaatcaatggattgatgatcggggctgatgattatatg
actaagccgtttcagccgctggagctgattgcccgcgtcaaggcgcagcttagaagatac
aagcgctataatgttcagcagaaggcaaaggagctaagttatctgggacttgtcatgaat
caggaacagcatatatgcaggttgaatgagaaagacctgaatcttacaccgattgaattt
cgtcttttatggtatctgtgtgagcgtcagggaaaggttgtcagtgcaagggagttgtac
accgcaatctggcaggaggaatatctctcatccagcaacaataccctgatggtacatatc
cggcatatccgtgaaaagatgaaggatcgcggagaacacccgcgctatatacaaaatgtc
tggggtgtgggctataagctgggagaaacactatga

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