Clostridium innocuum: G4D55_16940
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Entry
G4D55_16940 CDS
T06525
Symbol
vanR
Name
(GenBank) VanR-ABDEGLN family response regulator transcription factor
KO
K18349
two-component system, OmpR family, response regulator VanR
Organism
ciu
Clostridium innocuum
Pathway
ciu01502
Vancomycin resistance
ciu02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ciu00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
G4D55_16940 (vanR)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
G4D55_16940 (vanR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
ciu02022
]
G4D55_16940 (vanR)
01504 Antimicrobial resistance genes [BR:
ciu01504
]
G4D55_16940 (vanR)
Two-component system [BR:
ciu02022
]
OmpR family
VanS-VanR (VanE type vancomycin resistance)
G4D55_16940 (vanR)
Antimicrobial resistance genes [BR:
ciu01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Ser type [MD:
M00652
]
G4D55_16940 (vanR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Trans_reg_C
PDE8A_N
MarR_2
Alpha-amylase_N
IMS_HHH
Motif
Other DBs
NCBI-ProteinID:
QIX10646
LinkDB
All DBs
Position
complement(3484760..3485455)
Genome browser
AA seq
231 aa
AA seq
DB search
MDMNILVVDDEKEIAGLVEIYLKNENYKVDVCYTGTQALQNIRTRSYDLAILDVMLPDMD
GFSICRTIRQNYTWPIIMLTAKEQDIDKINGLMIGADDYMTKPFQPLELIARVKAQLRRY
KRYNVQQKAKELSYLGLVMNQEQHICRLNEKDLNLTPIEFRLLWYLCERQGKVVSARELY
TAIWQEEYLSSSNNTLMVHIRHIREKMKDRGEHPRYIQNVWGVGYKLGETL
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atggacatgaatatactggtagtggatgatgaaaaggaaattgccgggcttgtggaaatt
tatttaaaaaatgaaaattataaggtggatgtatgctatacagggacacaggctctgcag
aatatacggacacgttcctacgatctggccatattggatgtcatgcttccggatatggat
ggctttagcatttgtaggaccattcgtcagaactacacatggcccattatcatgctgaca
gcgaaggagcaggatattgataaaatcaatggattgatgatcggggctgatgattatatg
actaagccgtttcagccgctggagctgattgcccgcgtcaaggcgcagcttagaagatac
aagcgctataatgttcagcagaaggcaaaggagctaagttatctgggacttgtcatgaat
caggaacagcatatatgcaggttgaatgagaaagacctgaatcttacaccgattgaattt
cgtcttttatggtatctgtgtgagcgtcagggaaaggttgtcagtgcaagggagttgtac
accgcaatctggcaggaggaatatctctcatccagcaacaataccctgatggtacatatc
cggcatatccgtgaaaagatgaaggatcgcggagaacacccgcgctatatacaaaatgtc
tggggtgtgggctataagctgggagaaacactatga
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