Citrobacter sp. XT1-2-2: M4I31_15285
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Entry
M4I31_15285 CDS
T09034
Symbol
rlmC
Name
(GenBank) 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
cix
Citrobacter sp. XT1-2-2
Brite
KEGG Orthology (KO) [BR:
cix00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cix03009
]
M4I31_15285 (rlmC)
Enzymes [BR:
cix01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
M4I31_15285 (rlmC)
Ribosome biogenesis [BR:
cix03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
M4I31_15285 (rlmC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_25
Cons_hypoth95
Methyltransf_15
Methyltransf_12
Methyltransf_11
Methyltransf_4
Methyltransf_32
UPF0020
Motif
Other DBs
NCBI-ProteinID:
UQX57797
LinkDB
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Position
complement(3197810..3198937)
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AA seq
375 aa
AA seq
DB search
MQCALYDAGRCRSCQWIEQPVSHQLTAKMADLRQLLAEHAVAEWRAPVSGPERAFRNKAK
MVVSGSVEKPLLGMLHRDGTPEDLCDCPLYPASFSPVFAALKPFIARAGLTPYNVARKRG
ELKYLLLTESRFDGGMMLRFVLRSDAKLAQLRAALPWLQERLPQLKVITVNIQPVHMAIM
EGETEIFLTEQQALAERFNDVPLWIRPQSFFQTNPVVAGHLYATARDWVRQLPVNHMWDL
FCGVGGFGLHCATPQMKLTGIEIAPEAITCAKQSAQELGLQNLRFQALDSTQFATAQDEV
PDLVLVNPPRRGIGKPLCDFLSRMAPRFIVYSSCNAQTMAKDIHELPGYRIDRVQLFDMF
PHTAHYEVLTLLSRQ
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgcagtgcgcactctatgacgccggtcgctgtcgttcctgtcagtggattgaacagccg
gtttcccaccaactcaccgccaaaatggccgatttacgccaactgcttgctgaacatgcg
gtggcggagtggcgcgcgccggtcagcggcccggaacgcgcttttcgcaacaaagccaaa
atggtggtcagcggcagcgtggaaaaaccactgcttgggatgctgcatcgtgacggtacg
ccggaggatttgtgtgattgtccgctctatcctgcgtctttttcgcccgtatttgccgcg
ctcaaaccgtttatcgcccgtgcggggttaacgccctataatgtggcgcgtaaacgcggg
gagcttaaatatctgctgttaacggaaagccggtttgatggcggtatgatgctgcgcttt
gtcctgcgttcagacgccaaactggcgcagttgcgtgcagcgctaccgtggttgcaggaa
cggttgccacagttaaaagtgatcactgtgaatattcaaccggtgcatatggcgattatg
gaaggggagacagaaatcttcctcaccgaacaacaggcgctggcggaacgctttaatgat
gtgccgctgtggatacgtccgcagagctttttccagaccaacccagtggtggcgggacat
ttatatgccaccgcacgcgactgggtgcgccagcttccggttaatcatatgtgggatctg
ttttgcggcgtaggagggtttggtctgcattgcgccacgccgcagatgaaactgacaggt
attgaaatcgcgccagaggcgattacctgtgcgaaacagtcggcgcaggagcttgggttg
caaaatctgcgttttcaggcgctggattcgactcagtttgctaccgcccaggatgaagta
cccgatctggttttggtgaacccaccgcgtcgcgggattggcaaaccgctgtgcgatttt
ctttcccgcatggcgccacgttttattgtctattcaagctgcaatgcgcaaaccatggcg
aaggatattcacgagttgccagggtatcgcattgaccgcgttcagcttttcgacatgttc
ccacataccgcgcattacgaagtgttaacgctgctcagcagacaataa
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