Carettochelys insculpta (pitted-shelled turtle): 142002888
Help
Entry
142002888 CDS
T11194
Symbol
BRCA1
Name
(RefSeq) breast cancer type 1 susceptibility protein
KO
K10605
breast cancer type 1 susceptibility protein [EC:
2.3.2.27
]
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz03440
Homologous recombination
ciz03460
Fanconi anemia pathway
ciz04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
142002888 (BRCA1)
09124 Replication and repair
03440 Homologous recombination
142002888 (BRCA1)
03460 Fanconi anemia pathway
142002888 (BRCA1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ciz01009
]
142002888 (BRCA1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ciz04121
]
142002888 (BRCA1)
03036 Chromosome and associated proteins [BR:
ciz03036
]
142002888 (BRCA1)
03400 DNA repair and recombination proteins [BR:
ciz03400
]
142002888 (BRCA1)
Enzymes [BR:
ciz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
142002888 (BRCA1)
Protein phosphatases and associated proteins [BR:
ciz01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
142002888 (BRCA1)
Ubiquitin system [BR:
ciz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
142002888 (BRCA1)
Multi subunit type E3
BRCC complex
142002888 (BRCA1)
Chromosome and associated proteins [BR:
ciz03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
142002888 (BRCA1)
DNA repair and recombination proteins [BR:
ciz03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
142002888 (BRCA1)
BRCA1-A complex
142002888 (BRCA1)
BRCA1-B complex
142002888 (BRCA1)
BRCA1-C complex
142002888 (BRCA1)
BRCA complex
142002888 (BRCA1)
FA (Fanconi anemia) pathway
Downstream FA components
142002888 (BRCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT_assoc
BRCT
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_2
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
RING_XB3-XBAT31
BRCT_2
zf-Nse
zf-RING_5
zf-RING_10
zf-RING_6
zf-MIZ
zf-RING_4
Zf_2nd_IFT121
zf-ANAPC11
U-box
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
142002888
NCBI-ProteinID:
XP_074835474
LinkDB
All DBs
Position
28:complement(6716054..6772494)
Genome browser
AA seq
1893 aa
AA seq
DB search
MDLSVAAIGDVQSVLLAMQKNLECPICLELIKEPVSTKCDHIFCRFCMFKLLSKKKKGLA
RCPLCKTDVTKRSLQENPRFKQLIEGLLETIHAFELDTGIKFLNSQDFSKKPVETNSTEL
LWKEGSIIQSKGYRNRQKGVTEVKEQEQEDPTLEANTTAQVADNMVRRSSLRNKRQKCES
DEAVYIELGSDSSEDLFKKAGGPVGIGEKGSFQTPPQKGVCEEDQKHAGKKSESPYNMWP
VKSGAGEILSSDILDECDFPEEDSIEDFKAAQVNVAEGHLKVSNSEAEQHHRTANANSLL
NEHIGLFHIAEEMDAEKTESSNKNEEPGLALSSENQLPESKKTGNDVQHTGAVEICQVDS
NSLHEREPALESLWQPKALLDNPLNQVSGKRLKRSIQKVNEWFSKSNEMLSSSSSQDALA
GAADAEDGDSNLSDRESCVSEETDLMINCLEVEVGCENDRSLSKSTRHNIEDKIFGKTYK
RERKSNHPVYTREMPQSPKVEDVTTDVKPSSNSKTNKLKRKRKTASELQPEDFIKKREGK
DLNKHSEDVNQCFADKNAERKIEEGVVTGSPMGGKNEDGMSAELSLGEGESILKTDTEKV
PSNSPDGEAAQNTCNRKTTKKMRSSLTKKSRHSARPMCTLQLVVDRNSGCPDQTELQIDS
YPSSEEPRKVDSEQKRVRRSRRLQLLTEKMIKETRRGEPNESSRKQTSESRDSSSSGIQR
NVLVHVSECKDSDEQQAALNYNVSPSDSELKGSDLEADKTHPNPENCCDGVQTGKGLLDV
KISMEDLNGGSVVPATDSQNSENQGSHSLLQPHSKNMEQVACPEQNVSANNQHTVRKPKQ
RELSACSPKADRHCTENDCGRFRNPKSSEAKIISDLNTETEDSELDTQYLRNMFRHSKRL
SFTLHPSPVKESGIESNASEAPRKSGASCLEYRHDNRDLKNKPSCVKKTADLGEICERED
TKTCKFAKSISGHSPETHFSSDAEYEHVSNDGKNISRAPDQVQLFSSSRATTAKIMNRSR
LKKRRQPKEKRISSEMVKESQNLNKSNECLHAQNNVEERIVQRTDLSAIHETGSGSGSNQ
GVEAKNKRMVLNLQPNPVLVSPIVCQQSPTEFSCKIIEKYGCEEECQQVKGGEEQVSQIP
RTGVPTCLISEEALEPAEETGGFPLLSETPDGLLCPAGDIKENTSISEIDRKEISAVFVK
TGENALLRELDSGSSSSKSTSQSFVREPRRLAQKLQSSEEDSSEDEELPCFQALISGKSA
STPMRPTKQVVPRIGSSATTPAEVLALPNSSSDNNKAAQKTLGVTLRDTCVSPSQESECS
VNLFSSQSNISEDLANRPQELKKPIMQASSFKEMRSFSESKEASPNSNGELIRRKSDLED
GHQGDQNVEPNLGEASGYDSEVSHPGDSSGLSSQGEILTTQQQDVMQSNLKKLQQEMAVL
EAVLEEHGTQGFELPPLPAELPPSRVEGMLPEGEMRPPRGTALSSEENLENHKLSTSKGL
SSDQFHIMLCDHSNTKTKELEEEGLKSLALQLSPSKAHLLKKGAVEQGHGKTKTHFQEGT
FQHVGAAVLLEEEAMKQRNQYRTEPENPAEQEFGTKLKSAAVPCGNECRIPNNSPLKIFG
RLTHCQTAESTNISDVSWNVNNGKNTQGCEQERRVFSSAPALHTAAGKENAKSPVVTCRR
QMSIVASGLNQSELLLVQKFARKTQSTLSNQVTDRTTHVIMKTDMELVCERTLKYFLGIA
GRKWVVSYEWVVQSFKEGRILDEYNFEVRGDVINGRNHQGPRRARRSQTGKLLKGFEICC
YGPFIDMRTAELEWMVKLCGASVVEQPHLFTHNANSTAVVVVQPDAWHENAGYRGLAAIQ
QECSAAVVTREWVLDSVACYERQAFDTYLVSQS
NT seq
5682 nt
NT seq
+upstream
nt +downstream
nt
atggacttatctgtggctgccattggagatgtgcaaagtgtgctcttggctatgcagaag
aacttggagtgcccaatatgtttggagttgataaaagagccagtctcaacaaaatgtgac
catatattctgcagattctgtatgtttaaacttctcagcaaaaagaaaaaaggcctagca
cgttgtccactgtgcaagactgatgttaccaaaagaagtctacaggaaaatccaagattt
aaacaactaattgaagggctgctggaaactatccatgcttttgaacttgacactggaatc
aagtttttaaacagtcaggatttttctaaaaaacctgtagaaaccaattctactgagctc
ctgtggaaggaagggtccatcatccaaagtaagggctacagaaaccgtcaaaaaggagtt
acagaagttaaagaacaagagcaagaggatcctaccttggaagctaacactactgcccag
gtcgcagacaacatggtcaggagaagttccctccgaaacaaaaggcagaaatgtgaatct
gatgaagcagtgtacattgaattgggatcagattcttctgaagacctttttaaaaaagca
ggtggtcctgttggaataggggagaaaggatcgtttcagactccacctcaaaaaggagtg
tgtgaggaagaccaaaagcatgctggaaagaaaagtgaaagtccatacaacatgtggcct
gtcaagtcaggtgcaggagaaatactctcatcagatatcttagatgaatgtgatttccca
gaggaggacagcattgaagacttcaaggctgctcaagtgaatgtggctgagggtcattta
aaggtttcaaactcagaagcagagcaacatcacagaacagccaatgccaactctttactg
aatgagcatataggtttattccacattgcagaagaaatggatgctgagaaaactgaatcc
agtaataaaaatgaagagcctggcttagcactcagttcagaaaatcagctacctgaaagc
aagaagacaggtaatgatgtccagcatacaggagctgtagaaatatgtcaggttgacagt
aactccttgcatgaaagagaacctgctttggagagtctgtggcagcccaaggctcttctt
gacaatcctttgaatcaagtttctgggaaaagactgaagagaagcattcaaaaagtcaat
gaatggttttctaaaagcaatgagatgctctcttccagttcctcacaggatgctcttgct
ggggcagctgacgcagaagatggagattcaaatttatcagatagagagtcctgtgtttca
gaggagactgacctgatgataaactgcctggaagttgaggtgggatgcgaaaatgataga
agtctgtcaaaatcaactaggcataacattgaagataaaatatttgggaaaacctataaa
agagagaggaagtcaaaccaccctgtctacacaagagagatgccacagagtccaaaagtg
gaagatgttactactgatgtgaaaccatcaagtaattccaaaacaaataaattaaaacgg
aaaagaaagaccgcatctgagctgcaacctgaggacttcatcaagaagagagaaggaaag
gatctcaacaagcactctgaagatgttaatcagtgctttgccgataaaaatgctgaaagg
aaaatagaggaaggagttgttactgggagtcccatgggtgggaaaaatgaggacggtatg
tcagcagagctttccctcggagaaggggaatccatactgaaaactgatactgagaaagta
ccatccaacagccctgatggagaagcagcacagaatacctgtaaccgaaagactactaaa
aaaatgagaagctcgcttacaaaaaaaagcaggcactcggccagacccatgtgtactctg
cagctggtagtggatagaaactcaggttgccctgatcagactgagctgcagattgatagt
tacccaagcagtgaggagccaagaaaagttgattcagaacagaaaagagtcagacgtagc
aggaggcttcagttgctgactgagaaaatgataaaagaaaccaggagaggtgaaccaaat
gagagctcaagaaagcaaaccagtgaaagtagagattcctcctcctctggaatacagagg
aacgtactggtccatgtgtctgaatgtaaagattctgatgagcagcaggctgcgctgaac
tataacgtatctccatcagactctgaactgaagggcagtgacttggaagcagacaaaaca
caccccaatcctgaaaactgctgtgacggtgtgcaaactggaaaaggcctcttagatgtc
aaaatatcaatggaggatttaaatggtggttctgttgtgcctgctacagattctcagaat
agtgaaaatcaaggcagccattcgctcctgcagcctcattccaaaaacatggagcaagtg
gcctgtccagaacagaatgtgtctgcaaataatcagcatacagtaagaaagcccaagcag
agagagttgtctgcttgctcaccaaaggccgataggcattgcacagaaaatgactgtgga
aggttcagaaatccaaagtcaagtgaagctaaaatcatttcagacttgaacacagaaact
gaagacagtgaactagatacacagtatctccgaaatatgttcagacattcgaaaagactg
tcatttactcttcatcctagtcctgtgaaggaatctgggatagaaagcaatgcttctgaa
gctccaaggaaatcgggtgcgagctgtttagaatataggcatgacaatagggacttgaaa
aacaaaccttcatgtgttaaaaaaacagcagacctgggtgagatttgtgagagagaagat
actaaaacgtgtaaatttgcaaaaagtatctctgggcatagtccagaaactcacttttcc
agtgatgccgaatatgagcatgttagcaacgatggcaagaatatttcacgagctcctgat
caagtgcagttattctcatcctcaagagcaaccactgccaagattatgaataggagcaga
ctgaaaaaacgaagacaaccaaaggaaaaaagaatttcatctgaaatggtgaaagaaagt
caaaacttaaacaaaagtaatgaatgcctacatgcccagaataatgtagaagagcgaatt
gtccaaagaactgatttaagcgctattcatgaaacaggctctggttcaggaagcaatcaa
ggagtagaagcgaaaaacaaaaggatggtattaaatttacagcccaatccagtgctggta
tctcctatagtttgtcaacaaagccctactgaatttagctgcaaaataattgaaaagtat
ggttgtgaagaggaatgccaacaagtaaagggtggtgaagaacaagtatcccaaattcct
agaactggtgtgcccacatgcttaatttcagaggaggctttggaacccgctgaagagact
ggtggttttccattgctctctgagacccctgatggcttattgtgtcctgctggtgatatt
aaagagaacacaagcatttctgaaattgataggaaagaaatttctgctgtatttgttaaa
acaggtgagaatgccttattaagagaactggacagtggcagcagtagttctaagtctacg
tcacaaagctttgttcgggaacccagaagactggcacagaaattgcagtcctccgaggag
gattctagtgaagatgaagaactaccatgctttcaggcactgataagtggcaaatcagca
agcaccccaatgcggcccacgaaacaggttgtgcctaggatagggtcttcagcaacaacc
ccagcagaggttcttgcattgccaaacagtagcagtgacaataataaagccgcacagaaa
acgcttggagtcaccttaagagatacatgtgtttctcccagccaagagtcagaatgctca
gttaacttattttcttcccagtccaacatctcagaagatttagccaacagaccacaagag
ttgaagaagccaataatgcaagcatcttctttcaaagaaatgagaagtttcagtgaaagc
aaagaagctagtccaaatagtaatggagagctgatcagaagaaaaagtgatttggaagat
ggacaccaaggagaccagaatgtggaaccaaatttaggggaagcatctggatatgacagt
gaagtcagtcacccaggagattcttctgggctgtcctcccagggtgagatccttaccaca
cagcagcaggatgtcatgcaaagcaacttaaaaaagcttcagcaggaaatggctgtcctt
gaggcggtgctggaagaacacggtacgcagggctttgaactcccacccctacctgctgaa
ctgcctccttccagagtggaaggaatgctcccagagggagagatgagaccacctagagga
acagcattaagttcagaagaaaatcttgaaaaccacaaactcagcacttcaaagggactt
tcaagtgatcagttccacataatgctatgtgaccattccaacacaaaaaccaaagagcta
gaagaagaaggtttgaaatctttggctttacagctttccccctctaaagcccatctatta
aaaaaaggagcagtggagcaaggccacgggaaaactaaaactcactttcaggagggaaca
tttcagcacgttggtgcagcagtgctgttggaagaagaggcaatgaaacaacgtaatcag
tatagaactgaaccagaaaatccagctgagcaggaatttggaacaaagctaaagagtgca
gctgttccatgtgggaatgagtgcaggattccaaacaactctcccttgaagatttttgga
agacttacccactgtcaaactgcagaatcaacaaatatttcagatgtatcttggaatgtt
aataatgggaagaacactcagggatgtgagcaggagagaagagtattttcctctgcacct
gctctgcacactgcagctggaaaagaaaatgccaaaagcccagttgtgacctgtaggaga
caaatgtcaattgtggcatcaggtctgaaccagagtgagcttttactggtgcagaagttt
gccaggaaaacccagagcactttatctaatcaagtaactgacagaacaacccatgtcatt
atgaaaacagatatggagctagtgtgtgagcggacactgaaatattttctgggcattgca
ggaagaaaatgggtagttagctatgaatgggttgttcagtcctttaaggaaggaaggata
ctggatgagtacaactttgaagtgagaggagacgtgatcaatgggagaaaccaccaaggc
cctaggagagctaggcgatcgcaaactggaaagctcctcaaaggctttgagatctgttgc
tatggacctttcattgatatgcgcacagctgagttagagtggatggtgaagctctgtggc
gcctctgtggtggagcagcctcatctattcacacacaacgcaaactctactgctgtagta
gttgtacagcctgacgcttggcatgaaaatgcagggtacagaggtcttgcagcaatccaa
caggagtgcagtgctgccgtggtgacccgagagtgggtgttagacagcgttgcatgctat
gagcgccaggcgtttgatacctacctggtgtcccagtcatga
DBGET
integrated database retrieval system
