Carettochelys insculpta (pitted-shelled turtle): 142004183
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Entry
142004183 CDS
T11194
Symbol
TRPC6
Name
(RefSeq) short transient receptor potential channel 6 isoform X1
KO
K04969
transient receptor potential cation channel subfamily C member 6
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
142004183 (TRPC6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ciz04040
]
142004183 (TRPC6)
Ion channels [BR:
ciz04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
142004183 (TRPC6)
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GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
PKD_channel
Ank
Ank_4
Ank_5
Cmr1_C
Motif
Other DBs
NCBI-GeneID:
142004183
NCBI-ProteinID:
XP_074837767
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Position
1:complement(37133812..37272339)
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AA seq
893 aa
AA seq
DB search
MSRGQPSAPQPDDPPAGRGRRTDSLDYLLRSSEESALPPYAYYPLRDNEDRLTIRRQTIL
REKGRRLASRGPAYMFNDRSMSLSLDEERFLDAAEYGNIPVIRKMLEECTSLNVNCVDYM
GQNALQLAVANEHLEITELLLKKENLSRVGDALLLAISKGYVRVVEAILNHSAFAEGKRL
ALSPSQSEFQHDDFYAYDEDGTRFSHDVTPIILAAHCQEYEIVHTLLRKGARIERPHDYF
CKCSECNQKQKHDSFSHSRSRINAYKGLASPAYLSLSSEDPVMTALELSNELAVLANIEK
EFKNDYKKLSMQCKDFVVGLLDLCRNTEEVEAILNGDVEMSHNSGEHHRPSLRRLKLAIK
YEVKKFVAHPNCQQQLLSIWYENLSGLRQQTMAMKFLVVLAVAVGLPFLSVAYWIAPCSK
LGRIMRGPFMKFVAHAASFIIFLGLLVMNAADRFNGTKLLPNETSTDHENQLFRVKTSSF
SWMEMLIISWVIGMIWSECKEIWSQGPKEYLFELWNILDFGMLAIFAASFIARFMAFWHA
SRAQDIVNAAVKDFATATLAPDIKYYTLARKEWDPNDPQIISEGLYAIAVVLSFSRIAYI
LPANESFGPLQISLGRTVKDIFKFMVIFIMVFVAFMIGMFNLYSYYRGAKANDAFTTVEE
SFKTLFWAIFGLSEVKSVVIHYKHTFIENIGYVLYGVYNVTMVIVLLNMLIAMINNSFQE
IEDDADVEWKFARAKLWFSYFEEGRTLPVPFNLVPTPKSLAYLLLRIKKLISKLFLCHKK
GFQEDAEMNELGQSKQSSIRSSDDLHLNSLSNPPRQYQKIMKRLIKRYVLKAQIDKESDE
VNEGELKEIKQDISSLRYELLEEKSQNTEDLAVLIRKLGEKLSFESREEESRI
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcggccagccctccgcgccgcagccggacgaccccccggccgggcggggccgc
cgcaccgacagcctggactacttgctgcggtcgtccgaggagagcgccctgccgccctac
gcctactacccgcttcgagataatgaggatagactaacaattcgtcgacagaccatactt
cgtgagaagggcagaaggctggccagtcgcggaccagcatacatgtttaatgatcgttcc
atgagtctttctctggatgaggagcgttttttggatgcagcagaatatgggaatattcct
gtgattcgtaaaatgctggaagaatgtacatcactaaatgtaaactgtgtggactacatg
gggcagaatgctttacagctggcagttgccaatgagcatctggagattacagagctttta
ctgaagaaggagaacctatcccgggttggggacgcgttgcttttggctattagtaaaggt
tatgttcgggtagtggaagccatcctaaatcattctgcatttgctgaaggcaagagactt
gccctaagccccagccagtcagaattccagcatgatgacttttatgcatatgatgaggat
ggaacccggttctctcatgatgttactccaatcattctggctgcccattgccaggaatat
gaaattgttcacaccctcttgagaaaaggtgctcgcatagaaaggccacatgactatttc
tgcaaatgcagtgagtgcaatcaaaagcaaaagcatgactctttcagtcattctaggtcc
agaatcaatgcctacaaaggtctggcaagccctgcctacctttccttgtccagtgaagat
ccagtaatgactgccttagaacttagcaatgagctggcagtgctcgcaaacattgaaaaa
gaattcaagaatgattacaaaaaattgtctatgcaatgcaaggattttgtagttggactt
cttgatttgtgcagaaatactgaagaagtggaagctattttgaatggagacgtggagatg
agccataacagtggagaacatcatcgtcccagccttagacgcttaaaacttgccattaaa
tatgaagtcaaaaaatttgtagcacatccaaactgccagcaacaacttctttcaatctgg
tatgagaatctctcaggtttacgtcagcagaccatggcaatgaagtttctagtcgttctt
gcagttgcggtagggctgcctttcctgtctgtggcttactggattgctccatgcagcaag
ctggggaggataatgcgtggaccgttcatgaagtttgtagcacatgcagcctctttcatc
atttttcttggtctgctagtcatgaatgcagccgacagatttaacggcaccaaactccta
cctaatgaaaccagtactgatcatgaaaaccagctgttcagagtgaagacatcttccttt
tcatggatggagatgctcattatctcttgggtaataggcatgatatggtctgaatgtaaa
gaaatttggtctcaagggcccaaggaatacctgtttgagttatggaatatacttgatttt
ggtatgttagccatttttgcagcatcattcattgcaaggtttatggcattttggcatgct
tccagagcccaggacattgttaatgcagctgtgaaggactttgcaacagcaacattggca
cccgacataaaatattacactttggccagaaaagagtgggatccaaacgatccacaaata
atatccgaaggcctctatgcaattgctgttgttttaagtttctccagaatagcctacatt
ctcccagccaatgaaagctttggaccactacagatatcgcttggcagaactgtgaaagac
atcttcaagttcatggtaatatttatcatggtgtttgtggccttcatgataggaatgttt
aatctctactcctactaccgtggagcaaaagcaaatgatgctttcacaactgttgaagaa
agttttaagacattgttctgggctatcttcggactttcagaagtgaagtcagttgtcatc
cattataaacacacatttattgagaatatcggttatgtcctttatggagtctataatgtt
actatggtcatagttttgttgaacatgctaattgcaatgatcaacaattctttccaggag
attgaggatgatgctgatgtggaatggaaatttgctagggctaaactctggttttcctac
tttgaggaggggagaactcttccagtacccttcaacctagtgccaactccaaaatctttg
gcgtatctcttactcagaataaaaaaattgatctctaaattgttcttgtgccataagaaa
ggatttcaggaagacgcagagatgaatgagcttggtcaaagtaagcaatcaagtatcaga
agttcagatgatctccatttaaatagtttaagtaatcctccccgacaataccagaagata
atgaagcgtctcattaaaagatatgtactgaaagcacagatagacaaggagagcgatgaa
gtcaatgaaggtgagctgaaggagataaaacaggacatctcaagtctccgttatgaactt
cttgaggaaaaatcccagaacactgaagacctggcagtactcattagaaaacttggggag
aaactttcatttgaatccagagaggaagaaagcaggatttaa
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