Carettochelys insculpta (pitted-shelled turtle): 142013077
Help
Entry
142013077 CDS
T11194
Symbol
PRDM6
Name
(RefSeq) putative histone-lysine N-methyltransferase PRDM6 isoform X1
KO
K20795
[histone H4]-lysine20 N-methyltransferase PRDM6 [EC:
2.1.1.361
]
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz00310
Lysine degradation
ciz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
142013077 (PRDM6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ciz03000
]
142013077 (PRDM6)
03036 Chromosome and associated proteins [BR:
ciz03036
]
142013077 (PRDM6)
Enzymes [BR:
ciz01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.361 [histone H4]-lysine20 N-methyltransferase
142013077 (PRDM6)
Transcription factors [BR:
ciz03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
142013077 (PRDM6)
Chromosome and associated proteins [BR:
ciz03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
142013077 (PRDM6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-H2C2_2
zf-C2H2_4
SET
zf-C2HE
zf-C2H2_jaz
zf-C2H2_11
Zap1_zf1
zf-C2H2_15
Motif
Other DBs
NCBI-GeneID:
142013077
NCBI-ProteinID:
XP_074850236
LinkDB
All DBs
Position
5:43257360..43365366
Genome browser
AA seq
569 aa
AA seq
DB search
MLKPGEPGGSAFLKVDPAYLQHWQQLFPQGGPLKGSGALQPLPPPERAEPSADSLRPRPA
SLSSASSGPASACVAAAASSSSSSSLAGLSSLAVAQIPAFGQLPSSEAACGAPASGQGKD
SCGAPRFRCTPEELDYYLYGQQRMEIIPLNQHTSDPNNRCDMCADNRNGECPMHGPLHSL
RRLVGTSSAAAAAPPPEIPEWLRDLPREVCLCTSTVPGLAYGICAAQRIQQGTWIGPFQG
VVLLPEKVQTGVIRNTQHLWEIYDQDGTLQHFIDGGEPSKSSWMRYIRCARHCGEQNLTV
VQYRSNIFYRACIDIPRGTELLVWYNDSYTSFFGIPLQCIAQDENLNVPSTVMEAMSRQD
TLQPFNKSSKLPPATPQRSIVFPQTPCNRNFSLLDKSGPIESGFNQISVKNQRVLASPTS
TSQLNSEFSDWHLWKCGQCFKTFTQRILLQMHVCTQNPDRNSQQSHLGGSRKGPYQCGHC
SQSFSQPSELRNHVVTHSSDRPFKCGYCGRAFAGATTLNNHIRTHTGEKPFKCERCERSF
TQATQLSRHQRMPNECKPITESTESIEVD
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgctcaagcccggcgagcccggcggctccgctttcctgaaggtggatccggcctatctc
cagcactggcagcagctcttcccgcagggcggcccgctcaagggcagcggcgccctccag
ccgctcccgccgcccgagagagccgagccctcggccgacagcctccgcccgcgcccggcc
tcgctctcctccgcctcgtccggcccggcctccgcctgcgtcgccgcagccgcctcctcc
tcctcctcctcctccctggccggcctgagctccctcgccgtggcccagatcccggccttc
gggcagctgcccagctccgaggccgcctgcggagccccggcctcggggcagggcaaagac
tcgtgcggcgccccccgctttcgctgcacgccggaggagctggactattacttgtacggc
cagcagcgcatggagatcatccccctgaaccagcacaccagcgaccccaacaaccgatgt
gacatgtgtgctgataaccgcaatggggagtgccccatgcatgggccacttcactctctg
cgccgcctagtgggcactagtagtgctgcagcagcagcacctccacctgagattcctgaa
tggcttagggacctgcctcgggaagtgtgtctgtgtaccagcactgtgcctggtctggcc
tatggcatctgtgctgctcagaggatccagcagggcacctggattggacctttccaggga
gtcgtccttctgccagagaaggttcaaacaggagtcatcaggaacacgcagcacctctgg
gaaatatatgaccaagatgggacactacagcactttattgatggcggggaacccagtaag
tcaagttggatgaggtatatccgatgtgccaggcactgtggggaacagaacctaacagta
gttcagtacaggtcaaatatattctacagggcctgtatagatatccccaggggcactgaa
ttgctggtgtggtacaatgacagctacacatctttctttggaatccctttacagtgtatt
gcacaggatgaaaacttgaatgtcccttcgactgtaatggaggccatgtccagacaagat
acactacagccatttaacaaaagtagcaaactaccccctgccactccacagcgatcaata
gtatttccacagactccgtgtaacagaaatttttctcttctggataagtctgggcccatc
gagtcaggatttaaccaaatcagtgtcaaaaaccaacgtgttcttgcaagcccaacttca
acgagccaactaaattctgagttcagtgactggcatctttggaaatgtgggcaatgcttt
aagactttcacgcagcggatcctcttacagatgcatgtgtgtacgcagaaccctgacaga
aattcccaacaatcccatttggggggctccagaaaggggccctatcagtgtggacactgc
tcccagtccttctcccagccttcagagctaaggaaccacgttgtcacccattccagtgac
agacctttcaagtgcggctattgcggtcgtgcctttgctggtgctacaacactcaacaat
catatccggacacatacgggagaaaagccctttaagtgcgagaggtgtgagaggagcttc
acacaagccacccagctgagtcgacaccagaggatgcccaatgagtgcaagccaataaca
gagagcacagaatcaatcgaagtggattaa
DBGET
integrated database retrieval system
