Carettochelys insculpta (pitted-shelled turtle): 142014232
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Entry
142014232 CDS
T11194
Symbol
TRAF3
Name
(RefSeq) TNF receptor-associated factor 3
KO
K03174
TNF receptor-associated factor 3
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz04620
Toll-like receptor signaling pathway
ciz04621
NOD-like receptor signaling pathway
ciz04622
RIG-I-like receptor signaling pathway
ciz05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
142014232 (TRAF3)
04621 NOD-like receptor signaling pathway
142014232 (TRAF3)
04622 RIG-I-like receptor signaling pathway
142014232 (TRAF3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
142014232 (TRAF3)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
TRAF3_RING
CCDC18_1st
zf-C3HC4
ATG16
Sina_ZnF
MPS2
CEP104_ZnF
zf-C3HC4_2
CCDC18_2nd
Cast
CEP162_coil_mid
Med28
zf-RING_6
CEP135_TSGA10_CC
ODF2_N
Rod_CreS
Tropomyosin
NOCA1_mid
zf-RING_UBOX
SNARE
Mua
ADIP
SPATA24
Motif
Other DBs
NCBI-GeneID:
142014232
NCBI-ProteinID:
XP_074852569
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All DBs
Position
6:complement(22500467..22612909)
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AA seq
566 aa
AA seq
DB search
MDTSKKTEPPVSVEVVQQRANPDHMLGAIYVPEQGGYKEKFVNTVEDKYKCEQCHLILCN
PKQTECGHRFCETCINALLSSASPKCTACQETIVKDKVFKDNCCRRELLALQIYCRNENK
GCNELLTLAQLLIHLRNDCQFEELPCPRAGCKEKILRRDLPDHVEKTCKYRETTCKYCKS
QVPMITLQKHEDKDCPSVTVSCPHKCSVTSLLRSELNAHLSECINAPSTCSFKRYGCTFQ
GTNQQIKAHEASSAVQHVNLLKEWSNSLENKVAMLQNESLEKNKSIQTLHNQICSFEIEI
ERQKEMLRNNESKILHLQRVIDSQADKLKELDKEIRPFRQNWEEADIMKTSVESLQNRVT
ELESVDKTAGQGARNTAVLETQLSRHDQMLSVHDIRLADMDLRFQVLETASYNGVLIWKI
RDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEY
DALLPWPFKQKVTLMLMDQGPSRRHLGDAFKPDPNSSSFKKPTGEMNIASGCPVFVAQTV
LENGTYIKDDTIFIKVIVDTSDLPDP
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggacaccagtaaaaagacagaaccccctgtgtctgtggaagtggtacaacaaagagca
aatcctgatcacatgcttggagcaatatatgttcctgagcaaggtggttacaaagagaaa
tttgtaaacacagtggaggacaagtataaatgtgaacagtgtcatctcatattgtgcaat
cctaaacagacagaatgtggacacagattctgtgagacctgcattaatgcattgttaagt
tctgctagtccaaaatgtacagcgtgtcaagagacaatagttaaagataaggtatttaag
gataactgctgtaggagggagcttcttgcccttcagatatattgccgaaatgaaaataaa
ggttgcaatgaactgctaactctggcacagttactgatacatttgcgaaatgactgtcag
tttgaagaacttccatgtccccgcgctggttgcaaagaaaaaatactgcggagagacttg
ccagaccatgtagaaaagacctgtaaatatcgggagactacatgtaaatactgtaaaagc
caagtcccaatgattacattgcagaaacatgaagataaagactgtccctctgtcacggtt
tcatgtcctcataaatgcagtgttacatcacttttgaggagtgagttgaatgcacatttg
tcagaatgtattaatgccccaagtacctgtagttttaagcgttatggctgcacttttcag
ggaacaaatcagcaaattaaagcacatgaagccagctcagcagtgcagcatgttaactta
ttgaaagagtggagtaattctctagaaaataaggtggccatgctccagaatgaaagtttg
gaaaagaacaagagtatacaaactttacataatcagatttgtagctttgaaatagaaatt
gaaagacagaaggaaatgctgcggaataatgaatctaaaatacttcatttacagcgagtg
atagacagtcaagcagacaaattgaaagaactggacaaagagattcgccccttccgacag
aattgggaggaggcagacatcatgaagaccagtgtggaatccctccagaacagagtgact
gaactggaaagtgttgataaaactgcaggacaaggagctcgaaatacagccgtactggag
acacagttaagtagacacgatcaaatgctgagtgttcatgatattcgtttggctgacatg
gacctccgattccaggtgctagagactgccagctacaatggagtattaatttggaaaatt
cgagactataaacgtcggaaacaagaggctgtcatgggaaagactctgtccttgtacagt
cagcccttttatactggatactttggctacaagatgtgtgccagagtttatcttaatgga
gatggcatgggaaaagggacacatttatcactgttttttgtcataatgcgtggagaatat
gatgccttacttccttggccatttaaacagaaagtgactctgatgctaatggatcaagga
ccttctcgacgtcacttaggagatgctttcaagccagacccaaacagcagtagtttcaag
aagcctactggagaaatgaacattgcatctggctgccctgtctttgtggcccaaacagta
ctagaaaatggaacgtatattaaagatgatactatttttattaaagtcatagtggataca
tcggatctaccagacccctga
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