KEGG   Carettochelys insculpta (pitted-shelled turtle): 142015582
Entry
142015582         CDS       T11194                                 
Symbol
SMNDC1
Name
(RefSeq) survival of motor neuron-related-splicing factor 30
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
ciz  Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ciz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    142015582 (SMNDC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ciz03041]
    142015582 (SMNDC1)
Spliceosome [BR:ciz03041]
 Complex A
  U2 snRNP components
   U2 related factors
    142015582 (SMNDC1)
 Complex B
    142015582 (SMNDC1)
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    142015582 (SMNDC1)
SSDB
Motif
Pfam: SMN_Tudor TUDOR TraX-like
Other DBs
NCBI-GeneID: 142015582
NCBI-ProteinID: XP_074855300
LinkDB
Position
7
AA seq 238 aa
MSEDLAKQLASYKAQLQQVEAALSGNGENEDLLKLKKDLQEVIELTKDLLSTQPSEALAS
SDSSASALPSHSWKVGDRCMAIWSEDGQCYEAEIEEIDEENGTAAITFAGYGNAEVTPLL
NLKPVEEGRKAKEDSGNKPMSKKEMIAQQREYKKKKALKKAQRIKELEQEREDQKVKWQQ
FNNRAYSKNKKGQVKRSIFASPESVTGKVGVGTCGIADKPMTQYQDTSKYNVRHLMPQ
NT seq 717 nt   +upstreamnt  +downstreamnt
atgtcagaagatcttgcaaaacagctagctagctataaagctcagctccagcaagttgag
gctgcgctgtctggcaatggagaaaatgaagacttactaaaattaaaaaaggatttacag
gaagttatagaattaaccaaagatctcctttcaacacaaccttctgaagcccttgcaagt
tctgatagttctgcttctgccctgcccagtcactcctggaaggttggggatagatgtatg
gccatatggagcgaagatggacagtgttatgaagctgagattgaagagatagatgaggag
aatggcactgctgcaatcacatttgctggatatggcaatgctgaagtcacacctctgctc
aacctcaaacctgtagaagagggaagaaaggcaaaagaggacagtggcaacaaacccatg
tccaaaaaagagatgattgcccagcaacgagaatataaaaagaagaaagctttgaaaaaa
gcccagagaatcaaagaacttgaacaggaacgagaggaccagaaagtcaagtggcaacag
ttcaacaaccgagcctattctaaaaacaaaaaaggccaggtaaagaggagtatttttgct
tctcccgagagtgtgactggcaaagtcggagttggaacatgtggaattgcagacaaaccc
atgacacaatatcaagatacctctaaatataatgtcaggcatttgatgcctcagtaa

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