Carettochelys insculpta (pitted-shelled turtle): 142020996
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Entry
142020996 CDS
T11194
Symbol
PDGFRB
Name
(RefSeq) platelet-derived growth factor receptor beta isoform X1
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz04010
MAPK signaling pathway
ciz04020
Calcium signaling pathway
ciz04510
Focal adhesion
ciz04540
Gap junction
ciz04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
142020996 (PDGFRB)
04020 Calcium signaling pathway
142020996 (PDGFRB)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
142020996 (PDGFRB)
04540 Gap junction
142020996 (PDGFRB)
09142 Cell motility
04810 Regulation of actin cytoskeleton
142020996 (PDGFRB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ciz01001
]
142020996 (PDGFRB)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
ciz04090
]
142020996 (PDGFRB)
Enzymes [BR:
ciz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
142020996 (PDGFRB)
Protein kinases [BR:
ciz01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
142020996 (PDGFRB)
CD molecules [BR:
ciz04090
]
Proteins
142020996 (PDGFRB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
ig
Ig_2
V-set
C2-set_2
C1-set
VEGFR1-3_N_Ig-like
VEGFR-1-like_Ig-like
Motif
Other DBs
NCBI-GeneID:
142020996
NCBI-ProteinID:
XP_074865442
LinkDB
All DBs
Position
15:complement(31950680..32016678)
Genome browser
AA seq
1098 aa
AA seq
DB search
MWPAVQCNTTMLLPSLKMLLLLLAGLPAATSGSSKLHISPSDPEVTLSLLSNFSLMCSGE
AEVVWEREMQPIATSAEWRDGAFTSTLTLWNVTGLDTGEYVCTYNHSQSQKPAERKAVYV
FVPDPSLVFLPTTSEDSFIFISSSSEATIPCRVTDPHANVTLYEKKVNIPIAAVYDQQQG
FRGFFEDKTYICRATLGEHEVDSDPYYIYRIQVSSLNVSISAVQTMVKRGENITVMCTVS
GNEVVDFSWFYPRQEAGKAMTPVTEFLPGSSHDIRSIVTIQNAELEDAGVYSCHVSEVYH
QNTDRKDIEISVIEHGFVRIHTSLNDIELAEVHKSHILQVEIEAYPLPTIVWLKDNKTLT
VGNSSEFTLTSRILSETRYQTILTLVRVKQKEGGLYTVRAFHEDDTQELSFHLQINVPAS
VLQLKENRNVSSGEQTVTCFTEGMPEPQLSWFTCSNIKGCGTQEQPTQLLGNDSEEIDLQ
TSTLYHETLKVYHVNSRLRLRQVDKPQLIRCSVQNLLGSNYQDITLVPHALPFKVVLILA
ILAVVVVLMVIVLVIFIVMWRKVRKPRYEIRWKVIESVSSDGHEYIYVDPMQLPYDCSWE
FSRDKLVLGRTLGSGAFGRVVEATAHGLSHSQSMMRVAVKMLKSTARSSEKQALMSELKI
MSHLGPHLNIVNLLGACTKGGPIYIITEYCRYGDLVDYLLRNKHTFLQYYTEKARREMEL
YGNASEEDKVYSLTSFSVESDGGYMDMSKDDSLDYVPMSDMKGEIKYADIESSNYGTAYE
LDSYSPSAPERTDRTTLINESPLLSYTDLVGFSFQVANGMEFLASKNCVHRDLAARNVLI
CEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLW
EIFTLGGTPYPELPMNEQFYNAIKRGYRMSKPTHASNEIYDIMQKCWEEKFEIRPSFSQL
VVLMGNLLADAYKKRYKQVEEEFLKSDHPAVLRTRPRLLGVASSSGTGSVLYTDVQQDVG
DNDYIIPLPDPKPDGINDAPQEASISRASSTLNEANTASTVSCDSPLDLQPEGEQEPELK
SGSQEPNPRHHDTEESFL
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atgtggcctgcagtgcagtgtaacaccaccatgctgcttccatcgctgaagatgcttctc
ctcctcctggcaggtctgccagccgcgacatccggaagcagcaagctgcacatttcaccc
agcgaccccgaagtcaccctcagtctcttgagcaacttctccctgatgtgctcgggagag
gccgaggtggtctgggaacgggagatgcagcccatagccacgtcagctgagtggagagac
ggcgccttcaccagcacgctcacgctctggaacgtgacaggcctcgacacgggggagtac
gtctgcacctacaaccactcccagagccagaagcctgcggagaggaaggctgtctatgtc
tttgtgccggacccctccttggtcttcctccccaccacctccgaggactctttcatcttc
atcagcagctccagcgaggccaccatcccgtgccgcgtgaccgacccccacgccaacgtg
actctctacgagaagaaggtcaatatccccattgccgcagtctatgaccagcagcaaggt
ttcaggggtttcttcgaggacaagacctacatctgcagggcaacgctgggagagcacgag
gtggactccgacccgtattatatctacagaatccaggtctcctccctgaacgtttccatc
agcgcagtgcagaccatggtgaaacgaggcgaaaacatcaccgtgatgtgcactgtgagc
ggcaacgaagtggtcgatttcagctggttttaccctcgccaggaggcgggtaaggccatg
acgccggtgacagaattcttgcccggatccagccatgacatccgctccatcgtaaccatc
cagaacgcagagctggaggacgcgggcgtctacagctgccacgtctctgaggtctaccac
cagaatacggacaggaaggacattgagatcagtgtgattgagcacggctttgtgaggatc
cacaccagtctgaatgacatcgagctggctgaggtgcacaagagccacatcctccaggtg
gagattgaggcctatccactgccaaccatcgtgtggctgaaagacaacaaaaccctgaca
gtggggaacagcagcgaattcaccctcaccagcaggatcttgtcagagaccaggtatcaa
accattctgaccctggtacgggtgaagcagaaagaagggggactctacaccgtccgggcg
ttccatgaggatgacactcaggagctgtccttccacctgcaaattaatgtgccggccagc
gtgctgcagctgaaggagaacaggaatgtcagcagcggggagcagacagtcacgtgcttc
acggaagggatgcctgagccacagctgagctggttcacctgcagcaacatcaaagggtgc
ggcacccaagagcagcccacccagctgctggggaacgactcggaggagatagacctgcag
accagtaccctgtaccacgagacgctgaaggtttaccatgtgaacagcaggctgcggctg
cgccaggtggacaagccgcagctcatcagatgctccgtgcagaacctcctgggcagtaat
tatcaggacatcaccctggtcccgcatgccttgccctttaaggtggtgctcatcttagcc
atcctggctgtggtggtggtgctcatggtcatcgtcctggtgatcttcatcgtcatgtgg
cgtaaggtcaggaagccgcgctacgaaatccgctggaaggtgatcgagtcggtcagctcc
gacgggcacgagtacatctacgtggatcctatgcagctgccctatgactgcagctgggag
ttctccagggacaagctggtgctaggtcgcactctcggttctggcgccttcggccgagtg
gtggaggcaacggcccacggcctgagccattcgcagtccatgatgagagtagccgtgaaa
atgctcaagtctactgcccggagcagtgagaagcaggccctgatgtctgagctgaagatc
atgagccacctggggcctcacctaaacattgtcaacttgcttggagcctgcacgaaagga
ggccccatctacatcataaccgagtattgccgctacggagacctcgtggactatctgctc
cggaacaagcacaccttcctgcagtactacacggagaaggcgaggcgagagatggagctg
tacggcaatgcttccgaagaggacaaagtgtacagcctcacctccttttctgtcgaaagc
gacgggggttacatggatatgagcaaagatgactccctggattatgttcccatgtcagat
atgaagggagagatcaagtatgctgatatcgagtcctccaactacggcactgcctatgag
ctggacagctattccccctcagctccggaaaggacagaccgcacgaccctgataaacgag
tccccgctcctgagctacacagacctggttgggtttagtttccaggtggccaatggaatg
gagttccttgcatccaaaaactgtgtgcaccgagacctggcagcgaggaacgtcctcatc
tgcgaggggaagctggtgaagatctgtgacttcggcctggccagagatatcatgagggat
tccaactacatctccaaaggcagtaccttcctgcctttgaaatggatggcgcccgagagc
atcttcaacaatctctacacgacgctgagtgacgtgtggtcttttgggatccttctctgg
gagatattcactctgggtgggactccgtaccctgagctacccatgaacgaacagttctac
aatgccatcaaacgtggctaccgcatgtctaagcccacccatgcttccaacgagatctat
gacatcatgcaaaaatgttgggaagagaagtttgagataagaccttccttctcccagctg
gtggtactgatgggaaacctcctggcagatgcatacaagaagaggtacaagcaggtcgag
gaggaattcctgaagagtgaccacccggctgttttgcgcacgcggcccaggctcctaggg
gtcgcctccagctcgggcactggaagtgtcctctatacagatgtgcagcaagatgtgggg
gacaatgattacatcatcccccttcctgatcctaagccagatggaatcaacgacgcccct
caagaggcttccatcagccgcgccagttctaccctgaacgaagcaaacacggcatccacc
gtatcctgtgacagccccctggacctgcagccggaaggggaacaggaaccagaactgaag
tcaggcagccaggagccaaatccgaggcaccacgacacggaagagagttttctgtag
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