Carettochelys insculpta (pitted-shelled turtle): 142023051
Help
Entry
142023051 CDS
T11194
Symbol
SMG6
Name
(RefSeq) telomerase-binding protein EST1A isoform X1
KO
K11124
protein SMG6 [EC:3.1.-.-]
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
142023051 (SMG6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ciz03019
]
142023051 (SMG6)
03032 DNA replication proteins [BR:
ciz03032
]
142023051 (SMG6)
Messenger RNA biogenesis [BR:
ciz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
142023051 (SMG6)
mRNA cycle factors
Common to processing body (P body) and stress granule
142023051 (SMG6)
DNA replication proteins [BR:
ciz03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
142023051 (SMG6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
PIN_4
EST1
Motif
Other DBs
NCBI-GeneID:
142023051
NCBI-ProteinID:
XP_074869700
LinkDB
All DBs
Position
19:complement(1288853..1447355)
Genome browser
AA seq
1424 aa
AA seq
DB search
MAAELERVRVSAAELRGSLAALGRAPGGGGRENMKELKEPRHRKDNRRPDLEIYKPGLSR
LRNKHALLKQEASGYEGIRCEESKNETASDKAPAVTGGGSQVAGELSKGDSQKQNDPSQK
NGEMECKSVFQVQENLHKHSVSEDWCPKIIRRTKKPDQQIYQPGKRLLTVAKEPASQLTC
DEIICKMEQLKAKGDEDTERDIDKGSNSTKLNKEEREVSLISEGVKTVRGEKGRRVERVD
RVRKSSDDLIQGRLGSTKRYSRSDKRRSRYRTCSTSSAGSNNSTEGAPLADGGKKRQERA
KERVRPRNQISASSTDSLEDDRVEETEAYGISSNSERKHSEQSRVSKSESDWSSNGKDVK
VALRVTFDSKTMNRDISVAQTDKKKLPKTFNVSDSIEALEVKGKDPQGRGRGILILPANT
DFSATAAGSPDSTQSGARLLLSAGGSKGPRGRGRGSTMRRLWDPNNPDQKPALKSQTSQL
LFLDTDDEVSPTSWGDVRQSQASYYKFQNSDNPYYYPSSKGQSAQYPYGGYALQYQMGPN
NSAYPSAYYPGYPGQSGQYVCSPLPSTPLSPEMEQQMRNIQQQELNTLLREAGNQEQQLS
NLLSRDCISPEGLEKMTQLRAEMLQLYERCILVDIEFSENQNVDQLLWKNAFYQVIEKFR
QLLKDPLGENAQEIRNKLLQLLDEGTIFFDNLLQKLQVSYQFKLEDYMDGMAIRSKPLRK
MVKYALISAQRCMICQGDICRYREQANDTANYGKARSWYLKAQHIAPKNGRPYNQLALLA
IYTRRKLDAVYYYMRSLAASNPILTAKESLMSLFEETKRKAEQLELKHHQVPELSPSRWG
KGKRSAFRQVGDDATRLEIWIHPSHSHCSQGHESGRDSGQDSHLGNLNPSDLNKRFILSF
LHAHGKLFTRVGMETFPAVAEEVLREFQVLLQHSPSPIGSTRMLQLMAINMFAVHNSQPK
ECLSEDCRSVLQEQATALGLCMFALLVRRCTSLLKEAAQAWPREVEQEEEEGDLKVSALP
QDLTELLPSVKVWSDWMLGHSATWNPPPTALELPKQASMDVWVTLADFCNVLTTVNQSEV
PLYKDPDDDLCLLSLEEDRLLSGFIPLLVAPQEPCYVEKTSDKGIAADCKRVTVLKYFLE
ALCGQEEPLLAFKGGKYVSVAPVPDAMGKEMESQEGKQLEDQKEDDLRIEAFEDDSEAEV
SGEEFDIRELRARKQALARKVAEQQRRQDKIQAVLKDQSQMRLMELEIRPVFLVPDTNGF
IDHLHSLKKLLAWRKFILVVPLIVINELDGLAKGPELEHRAGGHARLLQEKARRSVEFLE
ERFESRDSCLRALTSRGNELESISFRSEDTTGQQGNNDDLILSCCLHYCNDKAKDFMPTK
KDDPIRLLREVVLLTDDRNLRVKALTRNVPVRDIPTFLNWAQEG
NT seq
4275 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggagctggagcgggtgcgcgtctcggccgcggagctgagggggagcctggcg
gcgttggggagggccccggggggcgggggccgagagaacatgaaggagctgaaggagccc
aggcatcgtaaagataaccgacgtccagaccttgaaatctacaagcctggcctctcccgg
ctcaggaacaagcacgcactattaaaacaggaagcctcagggtatgaagggatcagatgt
gaggaatccaagaatgaaactgctagtgacaaagctcctgctgttactggagggggatct
caggtcgctggagagctcagcaaaggtgacagccagaagcagaatgatccttcccagaaa
aatggagagatggaatgtaaatctgtttttcaggttcaagagaatttgcataaacactct
gtttcagaagactggtgtcccaagatcatcaggagaaccaagaagccagaccagcagatc
tatcagcctgggaaacgcctgctaactgttgccaaggagccagccagccagctaacctgt
gatgaaatcatctgtaagatggagcagctgaaagccaaaggagatgaagacaccgaaagg
gacattgacaaaggcagcaatagtactaaactgaacaaagaggagagagaggtaagcctg
attagcgagggagtgaaaaccgtgaggggagaaaaaggaaggcgggtagagcgagttgac
agggtcaggaaatcaagtgatgacttgatccaggggaggctgggctccacaaagcgatac
tcccgctctgacaaacggaggagccgataccgcacctgtagcacaagctcagcagggagt
aacaacagcacagagggagccccgctggccgacgggggaaaaaagcgacaggagcgggcc
aaagaaagagtccgtcctagaaaccagatctctgcttcctctactgattctttggaagat
gacagagttgaagagacagaagcatatggcataagcagcaattcagaaagaaagcattca
gagcagagccgagtttctaaaagtgagagtgattggagtagcaatgggaaggatgtcaaa
gtagctttgcgtgtcacctttgatagcaaaaccatgaacagagacatctccgtggcacag
acagacaagaaaaagcttccaaagacttttaatgtaagtgactccatagaggctttggag
gtgaagggcaaggatcctcaagggagaggccgtgggattcttatcctgcctgccaacaca
gacttctctgccactgctgcaggctctcctgattccactcagtctggggccaggctcctg
cttagtgctggtggcagtaaggggcctagaggcaggggccgcggaagcaccatgcgcagg
ttgtgggatccaaacaacccagaccaaaaaccagctctgaagagccagacctcacagctt
ctttttctagatactgatgatgaagtgagtcccacttcctggggcgatgtccgccagtcc
caggcttcctactacaagtttcagaactctgacaatccttattattaccccagttcaaaa
ggccaaagtgctcagtatccctatggaggatatgctttgcagtatcagatgggccccaat
aacagcgcttaccctagtgcttactaccctggatatccaggccagtcagggcagtatgtc
tgcagtcccctcccctctacccctttgagtccggagatggagcagcagatgaggaacata
cagcagcaggaactcaacacacttctccgtgaggctgggaaccaggagcagcagctcagc
aacctgctttccagagactgcatcagccctgagggtcttgagaagatgacacagctgaga
gcagagatgttgcagttgtatgaacgatgcatcctagtggatattgagttctctgagaac
cagaatgtggaccagctgctctggaagaacgccttctatcaggtgattgaaaaattccgg
cagctcctcaaagatcctctaggcgagaatgcacaggaaattcggaacaaactgctacag
ctcctggatgagggcacaattttctttgacaatttgcttcagaagctgcaggtgtcgtat
cagttcaagctggaggattatatggatgggatggccattcgcagcaagcccttgcggaag
atggtgaagtacgcactcatcagtgcccagaggtgtatgatttgccaaggggacatttgc
cggtaccgggagcaagcgaatgacacagcaaactatggaaaagcacgcagttggtatctg
aaggctcagcacatagcccccaaaaatggccgtccatacaatcagttggctctgctggct
atttacacgcggaggaagctggatgcggtgtactattacatgcgcagcctggctgccagc
aacccaatcctcacagccaaggagagcctcatgagcctgtttgaagagacaaaacgcaag
gctgaacagctggaactgaagcatcaccaggtgccggaactcagccccagccgatggggg
aagggcaagaggtctgcattccgacaagttggggatgatgccactcgtctggagatctgg
attcatccctcccactcccactgctcccagggccatgagtccggcagggattcggggcag
gacagccatcttgggaacctgaaccccagtgatctgaacaaaaggttcatcctcagtttt
ctccatgcccatgggaagctgtttaccagggttgggatggagacattccctgccgtggcg
gaagaagtgctgagggagttccaggtgctgctgcagcacagcccctcacccattggaagc
acccgcatgctgcagctcatggctatcaacatgtttgcagtgcacaactctcagcccaaa
gagtgcctctcagaggactgtcgctcagtgctccaggaacaggccacagcactgggactc
tgcatgttcgccctgctggtgaggcgctgcaccagcttattgaaggaggctgcccaagct
tggccacgggaagtggagcaggaggaggaggaaggggatctcaaggtctctgccttaccc
caggacctgacggagcttctccccagtgtgaaagtctggtcagactggatgcttggccac
tcggccacctggaaccctcctcccaccgccctggagctgcccaaacaagcctccatggac
gtgtgggtgacgctggctgacttctgtaacgtgctgaccacagtgaatcagtcggaggtg
ccattgtacaaagaccctgatgatgacctttgcctgctcagtctggaagaggaccggctc
ctttcgggcttcatccccctgctggttgccccgcaggagccctgctacgtggagaaaacc
tcggacaagggtattgcagccgactgcaagagggtcacagttctgaagtatttcctggaa
gccctttgtggacaagaagagcctttgctggcattcaagggtggaaaatatgtgtcagtg
gcacccgtcccagacgccatgggaaaggaaatggaaagccaagagggaaaacaactggaa
gatcagaaggaggatgacttgaggatcgaggcatttgaagatgactctgaggctgaagtc
agtggagaagagtttgacatccgggaactcagagccaggaagcaagcgcttgccaggaaa
gtagctgagcagcagcggcggcaggacaagatccaggctgtgctgaaggatcagagccag
atgcggctgatggagctggagatcagacctgtcttcctggtgccggacaccaatggcttc
atcgaccacctgcacagcctgaagaaactgctggcgtggcggaagttcatcctagtggtg
cccctgattgtgatcaatgagctggatggcctggccaagggcccagaactggagcatcgg
gcggggggacatgcccgcctgctgcaggagaaagccaggcgctcggtcgagttcctggag
gaacgcttcgagagtcgcgacagctgcctgcgagctctgaccagccgaggcaacgagctc
gagtccatctccttccgcagcgaagacaccaccggccagcagggcaacaacgacgatctg
attctctcctgctgtctccattactgcaatgacaaggccaaggacttcatgcccaccaag
aaagatgaccccatccggctgctgcgagaggtggtgttgctcacggacgatcggaacctg
cgcgtcaaggcactgacccggaacgtgcccgtgcgagacattcccaccttcctgaattgg
gcgcaggagggctga
DBGET
integrated database retrieval system
