Carettochelys insculpta (pitted-shelled turtle): 142023381
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Entry
142023381 CDS
T11194
Symbol
RFNG
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase radical fringe isoform X1
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz00514
Other types of O-glycan biosynthesis
ciz04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
142023381 (RFNG)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
142023381 (RFNG)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ciz01003
]
142023381 (RFNG)
Enzymes [BR:
ciz01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
142023381 (RFNG)
Glycosyltransferases [BR:
ciz01003
]
Glycan extension
O-Glycan
142023381 (RFNG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
142023381
NCBI-ProteinID:
XP_074870290
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All DBs
Position
20:complement(26593407..26613624)
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AA seq
405 aa
AA seq
DB search
MTLSCFGLSKICFLLSVTFCAFLLLLIPRFQSTWRRRGYPKPHPQPPFNASCSEFHRQQA
EPSSTHHLNSEGTDIAHSVKDETVEKWKDYSLHAGGSSLKLEEQDGSSTSPLQSMLKDHY
RPPNDSIKENLELKDIFIAVKTTRRYHKTRLDLLFQTWISQVKRQTFIFTDWEDHELRLR
AGDHMINTNCSAAHTRQALCCKMSVEYDKFLQSGRKWFCHVDDDNYVNPQTLLRLLSAFS
HSQDVYVGKPSLDHPIEAADHVRSDGSTTVKFWFATGGAGFCISRGLALKMSPWASFGNF
ISTAERVRLPDDCTIGYIIEGLLDVKLLHSPLFHSHLENLQRLQGEAVLQQVTLSYGGPE
NKHNVVSVAGVFGLQQDPTRFRSIHCLLYPRTAWCPTKNLLWPQI
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgacactttcctgctttgggctcagtaagatctgcttcctgctgtctgttaccttctgt
gctttccttcttctgctaatccccagattccaaagtacctggcgacgtaggggctatcca
aaaccccatccacagcctccctttaatgcttcctgcagtgagttccaccgccagcaggca
gagcccagctcaacacaccatttgaacagtgaaggaactgatattgcacacagcgtgaaa
gatgaaactgtagaaaaatggaaagattacagcctacatgctgggggatccagcctgaaa
cttgaggagcaggatgggagctccaccagtcctcttcaaagtatgttaaaagaccactat
agacctccaaatgattctattaaggagaacctggagttgaaggatatttttattgctgtg
aaaacaacaagaaggtatcacaaaacaaggctggacttgctcttccaaacctggatttca
caggtcaaaagacagacgtttatatttacagattgggaggaccatgaactgcgcctacga
gcaggagaccacatgatcaacaccaactgctctgctgctcatacccgtcaggcactctgc
tgtaagatgtctgtggaatacgataaattcctccaatctgggagaaaatggttttgccat
gtggatgatgacaactatgtgaacccacagactctcctgcgcctcttatctgccttctca
cacagccaggatgtatatgtcgggaagccaagcctggaccaccctattgaggcagctgac
catgtccggagtgatggatcaaccactgtgaagttctggtttgctacaggaggagcaggg
ttctgtatcagtagaggcctggccctgaagatgagtccctgggccagctttgggaacttc
attagcactgcagagagggtacgtctgcctgatgactgcaccatcggttatataattgag
gggctgctggatgtgaagctactgcacagccccttgttccattcccatctggagaatctg
cagagactacaaggcgaggcagtgctgcagcaggtcaccctaagttatgggggccctgag
aacaaacataatgttgtgagtgtggcaggagtgtttggcctgcaacaagatcccactcga
ttcagatctattcattgccttctctatcctcgtactgcctggtgtccgactaagaatcta
ttgtggcctcagatctga
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