Carettochelys insculpta (pitted-shelled turtle): 142024271
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Entry
142024271 CDS
T11194
Symbol
IRF3
Name
(RefSeq) interferon regulatory factor 3
KO
K05411
interferon regulatory factor 3
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz04620
Toll-like receptor signaling pathway
ciz04621
NOD-like receptor signaling pathway
ciz04622
RIG-I-like receptor signaling pathway
ciz04623
Cytosolic DNA-sensing pathway
ciz05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
142024271 (IRF3)
04621 NOD-like receptor signaling pathway
142024271 (IRF3)
04622 RIG-I-like receptor signaling pathway
142024271 (IRF3)
04623 Cytosolic DNA-sensing pathway
142024271 (IRF3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
142024271 (IRF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ciz03000
]
142024271 (IRF3)
04131 Membrane trafficking [BR:
ciz04131
]
142024271 (IRF3)
Transcription factors [BR:
ciz03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
142024271 (IRF3)
Membrane trafficking [BR:
ciz04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
142024271 (IRF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
142024271
NCBI-ProteinID:
XP_074872212
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All DBs
Position
22:13970028..13975871
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AA seq
425 aa
AA seq
DB search
MGTPKPLIVPWLREKLDRGCYPGVAWLDTGHTRFRVPWKHGLRQDASTEDFQLFRDWAID
SGSYRPGQDPPVPSVWKRNFRSALNRKPGIQVLEDHSNDSDDPHKVYEILPPGAQTGAEA
PSTAGHAAVATCGQESLGGDFSSTQAEELDASLHALALSSPKEDAPDPGLIPGAPQDTAT
ELGGFPPPMLPAPLSLEQLMASNMLVTDFEVQVYYRGHLVLQTLVPNPRGFRLVAACEGP
SPWPELTDVVLPAAEAVSDQLQATYLVRLLQGLGAGVLLRVEGAALCASRQGRLHAFWGR
TETPEPGAEGGELPKEVYAPLYDLPRFVRELISFMEGQGQSPTYELWLCLGEAWPDMGRA
WKKKLIMVQVVPTALRTLHELSRAGGASSLRAEDLDLRISDSLGEAGLLAALRGWEERMD
SQPYG
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggggacccccaagccgctgatcgtgccgtggctgcgggagaagctggaccgcggctgc
tacccgggcgtggcctggctggacacggggcacacgcggttccgggtgccctggaaacac
gggctgcggcaggacgcgtcaaccgaggacttccagctcttccgggactgggctattgac
agtggcagctacaggccagggcaggacccccctgtgccctcagtctggaaacgcaacttc
cgctccgccctgaaccgcaagccggggatccaggtgctggaggatcacagcaacgactcg
gacgacccccacaaggtctatgagatcctgccccctggcgcccagacaggtgcagaggcc
cccagcacagctgggcatgcagcagtggccacctgtggccaggagagcttggggggtgat
ttctccagcacgcaggcggaggagctggacgctagtctgcatgccctcgccctctccagc
cccaaggaggatgctccagacccagggctcataccaggtgccccccaagacacagcaaca
gagctgggcgggttccctcccccgatgctgccggcccccctctccctggagcagctcatg
gcctccaacatgctggtgacggatttcgaggtgcaggtctattaccggggtcaccttgtg
ctgcagacgctggttcccaacccccgtggctttcggctggtggccgcctgcgagggcccc
agcccctggcccgagctcacggacgtcgtgctgccggcggcagaggccgtctccgaccag
ctgcaggccacctacctggtgcgcctgctgcaggggctgggggccggcgtgctgctgcgg
gtggagggggccgcgctctgtgccagccgccaggggcgcctgcacgccttctgggggcgc
accgagacccccgagccaggggctgaaggtggggagctgcccaaggaggtgtacgccccc
ctctacgacctgccccgcttcgtcagagagctgatcagcttcatggaggggcagggccag
tcccccacctatgagctgtggctgtgcctgggggaggcctggccagacatgggccgagcc
tggaagaagaagctcatcatggtgcaggtggtgcccacagccctgcggacactccacgag
ctgagccgggccgggggcgcctcctcgctgcgggccgaggacctggacctgcgcatctcc
gactcgctgggcgaggccgggctgctggctgccctgcggggctgggaggagcgcatggac
agccagccctacggctag
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