Caldichromatium japonicum: GWK36_02485
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Entry
GWK36_02485 CDS
T07151
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
cjap
Caldichromatium japonicum
Pathway
cjap03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cjap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GWK36_02485 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cjap03400
]
GWK36_02485 (nth)
Enzymes [BR:
cjap01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
GWK36_02485 (nth)
DNA repair and recombination proteins [BR:
cjap03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GWK36_02485 (nth)
Prokaryotic type
GWK36_02485 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
PP_kinase_C_1
HHH_8
Motif
Other DBs
NCBI-ProteinID:
QIK37054
UniProt:
A0A6G7VAQ0
LinkDB
All DBs
Position
complement(514561..515223)
Genome browser
AA seq
220 aa
AA seq
DB search
MNAQNCGELFARLRAVNPHPTTELIYRTPFELLVAVMLSAQATDKQVNQVTQTLFQIANS
PAAILALGEEGLKRHIRSLGLFNTKARHLLQTCAILLERHGGEIPRDRAALEALPGVGRK
TANVVLNTAFGEPTLAVDTHIFRVANRTGIAPGKTPLAVEQGLMRCIPAPFLQHAHHWLI
LHGRYVCTARRPRCPDCIIADLCAYPDKTTAAQARTSAHA
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcgcaaaattgcggcgaactcttcgcgcgtttacgggcggtcaatccccaccca
acaaccgagttgatctatcgcactcccttcgagctcttggttgctgtaatgctctcagcc
caggcgaccgataaacaagtcaatcaggtcactcagacgctgtttcaaatcgctaactca
cctgctgcaatcctggcgctcggtgaggaggggctcaaacgccatatccgctcgcttggc
ctcttcaataccaaggcgcgccatctcttgcagacctgcgctatcctgctcgagcgtcat
ggcggagagatcccgcgcgatcgggcagcactcgaggccctcccgggggtcgggcgcaag
accgccaatgtggttctcaatactgccttcggcgagccgacgctcgcggtcgatacccat
atcttccgcgttgccaatcgcaccgggatcgccccgggcaagacaccgctcgccgtcgaa
cagggtctcatgcgctgtatccctgcaccctttttgcagcatgcccatcattggctgatc
ctgcatgggcgctatgtctgcactgcccgccgcccgcgctgtccagactgtattatcgcc
gatctttgcgcctatcccgacaagaccaccgcagcacaggccaggaccagcgcacatgcc
tag
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