Caldichromatium japonicum: GWK36_10020
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Entry
GWK36_10020 CDS
T07151
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
cjap
Caldichromatium japonicum
Pathway
cjap01501
beta-Lactam resistance
cjap01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
cjap00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
GWK36_10020
01503 Cationic antimicrobial peptide (CAMP) resistance
GWK36_10020
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cjap02000
]
GWK36_10020
01504 Antimicrobial resistance genes [BR:
cjap01504
]
GWK36_10020
Transporters [BR:
cjap02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
GWK36_10020
Antimicrobial resistance genes [BR:
cjap01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
GWK36_10020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
QIK38257
UniProt:
A0A6G7VEN5
LinkDB
All DBs
Position
2058244..2061495
Genome browser
AA seq
1083 aa
AA seq
DB search
MTERLGIAGRIAAQFQASEITPLLALVGLLLGLFAVLVTPREEEPQIDVTFADIFIPFPG
ASASEIEHLVAGPAEQVLSEIKGIKHVYSVSRPGLAVVTVQYEVGEDNTQAIVRLFSKVM
SKQDWLPPNLGVGSPIIKPKGIDDVPILTLTLWSEDPRVRAYELGQVAHAIEQEIKRVPG
TRDVYTLGAPAQVVRVQLHPDRLAGYGLDLNQLRRALQSGNRIADNLSVTADNQEVLVQA
GTFLTSAEEIGDLVVGVHGGRPVYLRDVAEIERGPETPESYVLMGAGPAAAASGVSPGQP
RSAVTIAIAKQPGVNAVNVAQDVIERLEQLKGLFIPDHVEVTVTRNYGATADAKAKKLIS
KLAFATASVVFLVLLTLGWREAVIVGAAVIVTLMLTLFASWAWGFTINRVSLFALIFSIG
ILVDDAIVVVENIHRHLGLSQDPFSRLIPRAVDEVGGATILATFTVIAALLPMAFVTGLM
GPYMSPIPINASMGMLISLSVAFILTPWMSYQLLGGAARHPQGSQHTAQGHQQDKDRLQH
WLRRAFIRLIGPFVADRQGRRNRWLLLLGVVFLILGSFALPANQLVVLKMLPFDNKSEFQ
IILDMPEGMSLEQTLKVLSEMGEYLETVPEVANYQIYAGKAAPINFNGLVRQYYLRQGPH
LGDIQVNLVDAHHRKDKSHSIVLRLREPLQAIAKRYGGNAKLAEVPPGPPVLAPLVAEVY
GLDYDGQIEVARKVREVFERTPDVVDVDDSVEFASRKLTLVVDRAKAARLGVAQASVAQA
LASVLDGEDMSFLHGANVKYAVPIRVEYSEADKADLEQVLALRVRSESGQLVPLSEIVTA
VEGTRERSIYHKDLLPVVYVIGDMAGKTDSPLYGLFAIAATLTQELGLEQWYRQAPTNPY
GYSLKWDGEWQVTYETFRDMGAAYAVGLVLIYLLVVAQFRSYLVPLIIMAPIPLTLIGIL
PGHALLGAQFTATSMIGVIALAGIIVRNSILLVDFINQEVRAGASLEQAVIDSAAVRAKP
IVLTAVAAMAGAVFILDDPIFSGLAVSLLFGLFVSTLLTLVVIPVAYYGVMVKRVAWIRR
EII
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atgactgagcgcttagggatcgcggggcgcatcgccgcccagtttcaggcaagcgagatc
accccacttctggccctggtgggcctattgcttgggctgttcgcggtcttggtgaccccg
cgcgaagaagagccccagatcgatgtcaccttcgccgatatctttatcccctttccgggg
gcctcggcgagcgagatcgagcacctggtcgccggccctgccgaacaggtcctctccgag
atcaaggggatcaagcacgtctattcggtctcgcgcccggggcttgcggtggtgaccgtc
caatacgaggtcggcgaggacaacacccaggcgatcgtgcgcctattcagcaaggtgatg
tccaagcaagactggctgccgccgaacctgggcgtcggcagcccgatcatcaagcccaag
gggatcgacgatgtcccgatcctcaccttgaccctgtggtcggaggacccaagggtcagg
gcctatgaactcggacaggtcgcgcatgcgattgagcaggagatcaagcgggtgcccggg
acacgcgatgtctataccctgggtgcccctgcccaggtggtccgggttcagctgcacccc
gatcggcttgccggctatggcctggatctcaatcagctacgccgcgccctgcaatccggc
aaccggatcgccgacaacctgagcgtcactgcggacaatcaagaggtgctggtccaggcc
gggacctttttgacctcagcggaggagatcggcgacctggtggtcggggtccacggtggt
cggccggtgtatctgcgcgatgtcgccgagatcgagcgcgggcccgagacccccgagagc
tatgtgctgatgggcgcggggccggctgctgctgcatccggggtcagccctggtcagccg
cgctcggcggtgaccatcgccatcgccaaacagccgggcgtcaatgccgtgaatgtggcc
caggacgttatcgagcgcctggaacaacttaagggcctcttcatcccggatcatgtcgag
gtgaccgtcacccgcaactatggcgccaccgcggatgccaaggcgaaaaagctcatcagc
aagctggcattcgccaccgcctctgtggtcttcctggtccttctgaccctcggctggcgc
gaggcggtcatcgtcggggcggcggtgatcgtgaccctgatgctgacgctgtttgcctcc
tgggcctggggattcaccatcaaccgggtctcgctctttgccctgatcttttccatcggc
atcctggtcgatgacgccatcgtggtggtcgagaacatccatcgccacctgggcctcagc
caagaccctttctctcgcttgatccctcgcgccgtcgatgaggtggggggggcgacgatc
ctggcaaccttcacggtgatagccgcgctcctgccgatggccttcgtcactggcctgatg
ggcccctatatgagccccatcccgatcaatgcctcgatggggatgctgatctcattgtca
gtggcctttatcctgacgccctggatgtcttatcagctgctgggaggcgctgctcgacat
ccgcagggatcgcagcacaccgctcaaggccaccagcaggataaagaccggctccagcac
tggctgaggagggccttcatccgcctcatcggcccctttgtggccgatcggcaggggcgg
cgcaatcgctggctgttgctcttgggcgtggtgttcctgatcctcggctcctttgccctg
ccggccaaccagttggtggtcctcaagatgctgcccttcgacaacaagagcgagttccag
atcatcctcgatatgcccgaggggatgagcctggaacagacactgaaggtcctctctgag
atgggcgaatatctcgagaccgtgcctgaggtggccaactatcagatctatgcagggaag
gcggcgccgatcaatttcaacggtctggtgcgccagtactatctgcgccagggcccgcat
ctcggtgacatccaggtcaacctggtcgatgcccatcatcgcaaggacaagagccattcc
attgtcctgcgactgcgcgagccgctgcaggccatcgccaagcgctatggcggcaatgcc
aagcttgctgaggtcccgccaggtccgccggtgctcgcccccttggtcgccgaggtctat
gggctcgactatgacggtcagatcgaggtcgcgcgcaaggtgcgcgaggtctttgagcgc
accccggacgtggtggatgtcgatgactcagtcgagttcgcctcgcgcaagctgaccctg
gtcgtggatcgggccaaggcggcgcggctaggggtggcgcaggccagtgtcgcccaggcc
cttgccagcgtgctcgatggcgaggacatgagcttcctgcatggggccaatgtcaaatat
gccgtgccgatccgggtcgaatatagcgaggccgacaaggcagatctcgagcaggtcttg
gccctgcgcgtgcgttcagaaagcgggcaactcgtgccgctgtctgagatcgtcaccgcc
gtcgaggggacgcgcgagcgcagcatctatcacaaggacctcttgccggtggtctatgtg
atcggcgacatggcaggcaagaccgacagccccttgtacggcctctttgcgatcgccgcg
accctcacccaagaactcgggcttgaacagtggtatcgccaggcaccaaccaacccctat
ggctatagcctcaaatgggacggcgaatggcaggtgacctatgagaccttccgcgacatg
ggcgcggcctatgcggtaggtctggtactgatctatctcttggtggtggcgcagtttagg
agctatctcgtccccctgatcatcatggcgcccatccccctgaccctgatcggcatcctg
ccgggtcatgccctcttgggcgcgcagttcaccgccacctcgatgatcggggtcattgcg
ctggccgggatcatcgtgcgcaactcaatcctcctcgttgactttatcaaccaagaggtg
cgcgcgggtgcgagtctcgaacaggcggtgatcgattcagcagcagtgcgcgccaagccg
atcgtcctcaccgcagtggcggcgatggcaggcgccgtctttatcctggatgacccgatc
ttctcggggcttgcggtctctctgttgttcggcctgtttgtctcgaccctgctgaccttg
gtcgtcatccctgtggcctattacggcgtgatggtcaagcgggtcgcttggatcaggcgg
gagatcatctag
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