Callithrix jacchus (white-tufted-ear marmoset): 100384971
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Entry
100384971 CDS
T03264
Symbol
TRPC5
Name
(RefSeq) LOW QUALITY PROTEIN: short transient receptor potential channel 5
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04360
Axon guidance
cjc04929
GnRH secretion
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
100384971 (TRPC5)
09158 Development and regeneration
04360 Axon guidance
100384971 (TRPC5)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cjc01009
]
100384971 (TRPC5)
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cjc04040
]
100384971 (TRPC5)
Protein phosphatases and associated proteins [BR:
cjc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100384971 (TRPC5)
Ion channels [BR:
cjc04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
100384971 (TRPC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_3
Ank_4
PKD_channel
YVC1_C
LHD_TRPY1
LEH
Motif
Other DBs
NCBI-GeneID:
100384971
NCBI-ProteinID:
XP_035144263
Ensembl:
ENSCJAG00000007053
LinkDB
All DBs
Position
X:complement(104240692..104541989)
Genome browser
AA seq
974 aa
AA seq
DB search
MAQLYYKKVNYSPYRDRIPLQIVRAETELSAEEKAFLNAVEKGDYATVKQALQEAEIYYN
VNINCMDPLGRSALLIAIENENLEIMELLLNHSVYVGDALLYAIRKEVVGAVELLLSYRR
PSGEKQVPTLMMDTQFSEFTPDITPIMLAAHTNNYEIIKLLVQKRVTIPRPHQIRCNCVE
CVSSSEVDSLRHSRSRLNIYKALASPSLIALSSEDPILTAFRLGWELKELSKVENEFKAE
YEELSQQCKLFAKDLLDQARSSRELEIILNHRDDHSEELDPQKYHDLAKLKVAIKYHQKE
FVAQPNCQQLLATLWYDGFPGWRRKHWVVKLLTCMTIGFLFPMLSIAYLISPRSNLGLFI
KKPFIKFICHTASYLTFLFMLLLASQHIVRTDLHVQGPPPTVVEWMILPWVLGFIWGEIK
EMWDGGFTEYIHDWWNLMDFAMNSLYLATISLKIVAYVKYNGSRPREEWEMWHPTLIAEA
LFAISNILSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYF
YYETRAIDEPNNCKGIRCEKQNNAFSTLFETLQSLFWSVFGLLNLYVTNVKARHEFTEFV
GATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGGTLPPP
FNIIPSPKSFLYLGNWFNNTFCPKRDPDGRRRRRNLRSFTDRNADSLIQNQHYQEVIRNL
VKRYVAAMIRNSXTNEGLTEENFKELKQDISSFRYEVLDLLGNRKHPRRSFSTSSTELSQ
RDDTNDGSGGARAKSKSVSFNLGCKKKACHGPPLIRTMPRSSGAQGKSKAESSSKRSFMG
PSLKKLGLLFSKFNGHMSESSSEPMYTISGGIVQQHCMWQDIRYSQMEKGKAEACAQSEI
NLSEVELGEVQGAAQSSECPLACSSSLHCASSICSSNSKLLDSSEDVFETWGEACDLLMH
KWGDGQEEQVTTRL
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggcccaactgtactacaaaaaggtcaactactcaccgtacagagaccgcatccccttg
caaattgtgagggctgagacagagctctctgcggaggagaaggccttcctcaacgctgtg
gagaagggggactatgccactgtgaagcaggcccttcaggaggctgagatctactataat
gtcaacatcaactgcatggaccccctgggccggagtgccctgctcattgccattgagaac
gagaacctggagatcatggagctactgctgaaccacagtgtgtatgtgggtgatgcattg
ctctatgccatacgcaaggaagtggtgggcgctgtggagcttctgctcagctataggcgg
cccagtggagagaagcaggtccccactctgatgatggacacccagttctctgagttcaca
ccagacatcactcccatcatgctggctgcccacaccaacaactacgaaatcatcaaattg
cttgtgcaaaaacgggtcactatcccacggccccaccagatccgctgcaactgtgtggag
tgtgtgtctagctcagaggtagacagcctgcgccactctcgctcccgactgaacatctat
aaggctctggcaagtccctcactcattgccttatcaagtgaggatcccatcctaactgcc
ttccgcctgggctgggagctcaaggagctcagcaaggtggaaaatgagttcaaggctgaa
tatgaggagctctctcagcagtgcaagctctttgccaaggacctgctggaccaagctcgg
agctcccgggaactggagatcatcctcaaccatcgagatgaccacagtgaagagcttgac
cctcagaagtaccatgacctggccaagctgaaggtggcaatcaaataccaccagaaagag
tttgttgctcagcccaactgccaacagttgcttgccaccctgtggtatgatggcttccct
ggatggcggcggaaacactgggtagtcaagcttctaacctgcatgaccattgggttcctg
tttcccatgctgtctatagcctacctgatctcacccaggagcaaccttgggctcttcatc
aagaaaccctttatcaagtttatctgccacacagcatcctatttgactttcctcttcatg
cttctcctggcttctcaacacattgtcaggacagaccttcatgtacaggggcctccccca
acggttgtggaatggatgatattgccttgggttctaggtttcatttggggtgagattaag
gaaatgtgggatggtggatttactgaatacattcatgactggtggaacctgatggatttt
gcaatgaactccctctacctggcaactatttccttgaagattgtggcctatgtcaagtat
aatggttctcgtccaagggaggaatgggaaatgtggcacccaactctgattgcagaagca
ctcttcgcgatatccaacattttaagttcgttgcgtctcatatccctgttcacagccaac
tcccacttaggacctctacagatctctttgggacgcatgctgcttgatatcctcaaattc
ctctttatctactgcctggtactactagcttttgccaatggactgaaccagctttacttc
tattatgagactagagctattgatgagcctaacaattgcaaggggatccgatgtgagaaa
cagaacaatgccttctccacgctctttgagactcttcagtcactcttctggtctgtattt
ggccttttaaatttatatgtcaccaatgtgaaagccagacacgaattcactgagtttgta
ggagctaccatgtttggaacgtacaacgtcatctctctggtagtgctgctgaacatgctg
attgctatgatgaacaactcctaccagcttattgccgatcatgctgatattgagtggaag
tttgcaagaacgaagctctggatgagttactttgatgaaggtggcactttgccacctcct
ttcaacatcatcccaagccccaagtcatttctataccttggtaactggttcaacaacacc
ttctgtcccaaaagagaccctgatggtagacggagaaggcgaaacttgagaagcttcaca
gatcgcaatgcagacagtctgatacaaaatcaacattatcaggaagttatcaggaattta
gtcaaaagatatgtggctgctatgataagaaattccnaaacaaatgaggggctaacagaa
gaaaattttaaggaattaaagcaagacatctccagctttcgatatgaagttcttgacctc
ttgggaaatagaaaacacccaaggagaagcttttccactagcagcactgaactctctcag
agagatgatactaatgatggcagtggtggggctcgggccaaatccaagagtgtctctttt
aatttaggctgcaagaaaaaggcttgccatgggccacctctcatcagaaccatgccaaga
tccagtggtgcccagggaaagtcaaaagctgagtcatcaagcaaacgctccttcatgggt
ccttctctcaagaaactgggtctcctattctccaaatttaatggtcatatgtctgaatcc
agttcagagccaatgtacacaatttctggtggaattgttcagcagcactgtatgtggcag
gacatcagatattctcagatggagaaagggaaagcagaggcctgtgctcaaagtgaaatt
aacctcagtgaggtagaattaggtgaagtccagggcgctgctcagagcagtgaatgccct
ctagcctgttccagctctcttcactgtgcatccagcatctgctcctcaaattctaaactt
ttagactcctcagaggatgtatttgaaacttggggagaggcttgtgacttgctcatgcac
aaatggggtgatggacaggaagaacaagttacaactcggctctaa
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integrated database retrieval system
